Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4036 |
Symbol | clpX |
ID | 4648437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4318802 |
End bp | 4320082 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639807498 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_954819 |
Protein GI | 120404990 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.330745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.230586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA TTGGAGATGG CGGCGACCTG CTGAAGTGCT CGTTCTGCGG CAAGAGCCAA AAGCAGGTGA AGAAGCTCAT CGCGGGACCC GGCGTCTACA TCTGCGACGA GTGCATCGAC CTGTGCAACG AGATCATCGA GGAAGAACTC GCCGACGCCG ACGACGTCAA GCTCGATGAG CTGCCCAAAC CTGCGGAGAT CCGTGAGTTC CTCGAGGGCT ACGTCATCGG GCAGGACACC GCCAAGCGCA CGCTGGCCGT GGCCGTCTAC AACCACTACA AGCGCATCCA GGCGGGCGAG AAGGCCCGCG ACTCGCGCTC GGAGCCCGTC GAGCTGGCCA AGTCCAACAT CCTGATGCTC GGCCCGACGG GCTGTGGCAA GACCTACCTC GCGCAGACGC TGGCCAAGAT GCTCAACGTC CCGTTCGCGA TCGCGGATGC GACGGCGCTG ACCGAAGCCG GCTATGTCGG TGAGGACGTC GAGAACATTC TGCTCAAACT GATCCAGGCC GCCGACTACG ACGTCAAGCG CGCCGAGACG GGCATCATCT ACATCGACGA GGTCGACAAG ATCGCCCGCA AGAGCGAGAA CCCGTCGATC ACCCGGGACG TCTCCGGTGA GGGCGTACAG CAGGCGCTGC TGAAGATCCT GGAAGGCACG CAGGCGTCGG TGCCCCCGCA GGGCGGACGC AAGCACCCGC ACCAGGAGTT CATCCAGATC GACACCACCA ACGTGCTGTT CATCGTGGCA GGCGCGTTCG CCGGCTTGGA GCGGATCGTG TCCGACCGCG TCGGCAAGCG TGGCCTGGGC TTCGGCGCCG AGGTGAAGTC CAAGGCCGAG ATCGACACCC AGGACCACTT CGCCGAGGTG ATGCCCGAGG ATCTGATCAA GTTCGGTCTG ATCCCCGAGT TCATCGGCCG GCTCCCGGTC GTCGCGTCGG TGACGAACCT GGACAAGGAA TCGCTCGTGC AGATCCTGTC CCAGCCGAAG AACGCGTTGG TCAAGCAGTA CACCCGGCTG TTCGAGATGG ACGGTGTGGA GCTGGAGTTC GCCGAAGACG CGCTGGAGGC GATCGCCGAT CAGGCCATCC ACCGTGGCAC CGGCGCCCGC GGTCTGCGCG CCATCATGGA GGAAGTCCTG CTGCCGGTGA TGTACGACAT CCCGAGCCGC GACGACGTCG CCAAGGTGGT CGTCACCAAG GAGACCGTGC TGGACAACGT GCTGCCGACC ATCGTGCCGC GCAAGCCGTC CCGCACCGAG CGTCGCGACA AGAGCGCCTA G
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Protein sequence | MARIGDGGDL LKCSFCGKSQ KQVKKLIAGP GVYICDECID LCNEIIEEEL ADADDVKLDE LPKPAEIREF LEGYVIGQDT AKRTLAVAVY NHYKRIQAGE KARDSRSEPV ELAKSNILML GPTGCGKTYL AQTLAKMLNV PFAIADATAL TEAGYVGEDV ENILLKLIQA ADYDVKRAET GIIYIDEVDK IARKSENPSI TRDVSGEGVQ QALLKILEGT QASVPPQGGR KHPHQEFIQI DTTNVLFIVA GAFAGLERIV SDRVGKRGLG FGAEVKSKAE IDTQDHFAEV MPEDLIKFGL IPEFIGRLPV VASVTNLDKE SLVQILSQPK NALVKQYTRL FEMDGVELEF AEDALEAIAD QAIHRGTGAR GLRAIMEEVL LPVMYDIPSR DDVAKVVVTK ETVLDNVLPT IVPRKPSRTE RRDKSA
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