| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4012 |
|---|
| Symbol | |
|---|
| ID | 4647468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 4292328 |
|---|
| End bp | 4293110 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639807474 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_954795 |
|---|
| Protein GI | 120404966 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3622] Hydroxypyruvate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.167546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.990546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTTCC AGCTGGCGGT CTGCGCGGAG ATGGTGTTCA CCGATCTGCC GATCCTCGAC
CGGGTCCGCC GGATCGACGA GCTCGGCTTC GCCGCCGAGA TCTGGAGCTG GCACGACAAG
GACCTGGCCG CGCTGGCCAC GACGGGCGCC ACCTTCACGT CGATGACCGG CTACCTGCAC
GGCGACCTGA TCGACCCCGC GACCTGCGAC GAGGTCGTGC GGACCGCGGA GCGCAGCATC
AGAGCGGCCG AGACGCTCGG TGTCACACGA CTGAATCTGC ACACCGCCGA GCTGGTCGAC
GGCCGGGCCG CCCGACCCCG ACAGCGCAGC ACCGGCCAGA TGTGGTTGAC GGCGGCACGC
ACGTTGGAGC GCGTCGGTGA GCTCGGCGCC GCGTCCGGCG TGACGTTCTG CGTCGAGAAC
CTCAACACGA TCGTCGACCA TCCAGGGGTG CCGCTGGCCC GCGCCAAGGA CACGCTGGCC
CTTGTGGAAG GCGTCGGCCA CCCGAACGTC AAGATGATGC TCGACCTCTA TCACGCCCAG
ATCGGCGAGG GGAACCTGAT CGAACTGATC CACCGCTGCA AAGACGCGAT CGGTGAGATC
CAGGTGGCCG ATGTGCCCGG CCGCTGCGAG CCGGGCACAG GTGAGATCAA CTATCAGGCG
ATCGCAAACG CTCTGCGCGA CATCGGATTC GACGGCACCA TCGGAATGGA GGCGTGGGCA
TCCAACGCCG GGGTGGCGGG AAGTGAGGCC GCACTGGCGG CGTTCCGGAC CGCGTTCGCA
TAA
|
|---|
| Protein sequence | MSFQLAVCAE MVFTDLPILD RVRRIDELGF AAEIWSWHDK DLAALATTGA TFTSMTGYLH
GDLIDPATCD EVVRTAERSI RAAETLGVTR LNLHTAELVD GRAARPRQRS TGQMWLTAAR
TLERVGELGA ASGVTFCVEN LNTIVDHPGV PLARAKDTLA LVEGVGHPNV KMMLDLYHAQ
IGEGNLIELI HRCKDAIGEI QVADVPGRCE PGTGEINYQA IANALRDIGF DGTIGMEAWA
SNAGVAGSEA ALAAFRTAFA
|
|---|
| |