Gene Mvan_4010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4010 
Symbol 
ID4647466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4289956 
End bp4291014 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID639807472 
Productinner-membrane translocator 
Protein accessionYP_954793 
Protein GI120404964 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.310882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.999856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACCC ACGCAGATCT GGACGTCGCC GCCCACAAGG TGGTGCGGGA CGAACGCGTC 
AAGGAACGAA ACCGGCTGCA GCGCCTGCTG ATCCGGCCCG AGATGGGCGC AGGCATCGGC
GCGATCGGAA TCTTCGTCTT CTTTCTGGTC GTAGCGGCCC CGTTCCGGGA GGCCTCGTCG
CTGGCCACCG TGCTGTACGC CAGCTCGACG ATCGGCATCA TGGCGTGTGG AGTCGCGGTG
CTGATGATCG GCGGCGAGTT CGACCTGTCG GCCGGTGTTG CGGTGACCTT CAGCTCGCTG
GCCGCCTCGA TGCTCGCCTA CAACCTGCAC CTCAACCTGT GGGTGGGCGC GCTGCTGGCG
CTGATCCTGT CGCTGACGGT CGGCTTCTTC AACGGCTTTC TCGTGATGAG GACCAAGATC
CCCAGCTTCT TGATCACGTT GAGCACGTTC TTCATGCTCG CGGGCATCAA CCTGGCCGTC
ACCAAGCTGG TCGCCGGCCA GGTGGCCACC CAGAGCGTCA GCGACATGCA GGGGTGGGAC
TCGGCCCAGA AGGTGTTCGC CTCGTCATTC ACCCTGTTCG GGGTCAGCAT CCGCATCACC
GTGGTGTGGT GGCTGGTGTT CACCGCGATC GCGACGTGGG TGCTGTTCAA GACCAAGATC
GGCAACTGGA TCTTCGCCGT GGGCGGCGAC GCCGACAGTG CTCGCGCCGT AGGTGTTCCG
GTGACCAAGG TCAAGATCGG CCTGTTCATG TTCGTCGGCT TCTGCGCCTG GTTCGTCGGC
ATGCATCTGC TGTTCGCGTT CAACACCGTG CAGTCCGGTC AGGGCATCGG CAACGAGTTC
TTCTACATCA TCGCCGCGGT CATCGGCGGG TGCCTGCTGA CCGGTGGCTA CGGCACCGCG
GTCGGGGCGG CCATCGGTGC CTTCATCTTC GGCATGACCA ACCAGGGCAT CGTGTACGCA
GGCTGGGACC CCGACTGGTT CAAGTTCTTC CTGGGCGCGA TGCTGCTGTT CGCGGTGATC
GCCAACAACG CCTTCCGCTC CTATGCAGCA AAGAAGTGA
 
Protein sequence
MSTHADLDVA AHKVVRDERV KERNRLQRLL IRPEMGAGIG AIGIFVFFLV VAAPFREASS 
LATVLYASST IGIMACGVAV LMIGGEFDLS AGVAVTFSSL AASMLAYNLH LNLWVGALLA
LILSLTVGFF NGFLVMRTKI PSFLITLSTF FMLAGINLAV TKLVAGQVAT QSVSDMQGWD
SAQKVFASSF TLFGVSIRIT VVWWLVFTAI ATWVLFKTKI GNWIFAVGGD ADSARAVGVP
VTKVKIGLFM FVGFCAWFVG MHLLFAFNTV QSGQGIGNEF FYIIAAVIGG CLLTGGYGTA
VGAAIGAFIF GMTNQGIVYA GWDPDWFKFF LGAMLLFAVI ANNAFRSYAA KK