| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3999 |
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| Symbol | |
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| ID | 4647608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 4274939 |
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| End bp | 4275709 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639807461 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_954782 |
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| Protein GI | 120404953 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0825683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTATC CAGACCTGGC CGACAAGGCC GTGATCGTGA CGGGGGCGGC CGCCGGAATC
GGGCTGGCGA TCGCCGAGCG TCTGGCCGCC GAGCGTTGCC GGGTGGTGTG TGCGGACATC
GACGGCGCCG CAGCCGATGC CGCAGCAGCG GCCATCGGTA ATGGCGCTGT CGGTTACGCC
GTCGACGTGA GCGACGAGCC GCAAGTGGTG GGTATGGTCG AGGCCTGCGT CGCGGCCTTC
GGTGGGGTCG ACAAACTCGT GGCCAATGCC GGTGTGGTGC ATTTCGCGCC GCTCACCGAG
ACGACGGTCG ACGACTTCGA CCGGATCATC GGGATCAACC TGCGGGGCGC GTGGCTGTGC
ACCAAGCACG CGGCGCCGAG GATGGCCGAG CGCGGTGGCG GCGCCATCGT CAACATGTCT
TCGCTCGGTG GCCTTGTCGC TGCTGCCGGC ACCGCCGCAT ACGGCATGTC CAAGGCCGGG
ATCATCCATC TCAGCCGGAT CACCGCCGCC GAAATGCGTT CTGCCAACAT ACGGTCCAAT
GCGCTGCTAC CGGCGTTCGT CGACACCCCG ATGCAGCAGA CCGCGATGAC GATGTTCGAC
GAGGCCCTCG GTGACGGAGG TGCCGCGACG ATGATCGGAC GCCTGCAGGG GCGGATGGCC
GGCCCTGCGG AGATGGCAGG TGTCGTCGCG TTCCTGCTGT CCGACGCGGC CTCGATGGTC
AACGGGACGG CTCAACTCGC CGACGGCGGG ACCCTCGCCG CGCTGTGGTG A
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| Protein sequence | MTYPDLADKA VIVTGAAAGI GLAIAERLAA ERCRVVCADI DGAAADAAAA AIGNGAVGYA
VDVSDEPQVV GMVEACVAAF GGVDKLVANA GVVHFAPLTE TTVDDFDRII GINLRGAWLC
TKHAAPRMAE RGGGAIVNMS SLGGLVAAAG TAAYGMSKAG IIHLSRITAA EMRSANIRSN
ALLPAFVDTP MQQTAMTMFD EALGDGGAAT MIGRLQGRMA GPAEMAGVVA FLLSDAASMV
NGTAQLADGG TLAALW
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