| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3996 |
|---|
| Symbol | |
|---|
| ID | 4647605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4271939 |
|---|
| End bp | 4272808 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639807458 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_954779 |
|---|
| Protein GI | 120404950 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGCCA CGGGAGTTGA TCGCCGGGTT CCCGCCAGGT TGGTGCTGGC CACCCGCGAC
GGCCAGTTGC CTGGCGCTGA CCTGCGCGTC TACCAGTTCC ATTCGCACCA GACGCAGGTC
CCACCGCTTC GCGACATCGC CGTCATCGGA TGGCAGTCCC GTGCACAGAT CGCGCTGCGC
TGCGGTGCGA TTCGCAGCCG CGCCCAGATG AGCCCCGGCG ATTTCTCCAT CCTGAGGCCC
GGCTACGAGT CGACATGGCA ATGGAGTAGA GGTTTCCAGG CCACGGTGTT GTATCTGAAT
GAGCGGCGGT TCGCCGATTT CGCCTCCGAG GTCTTCGACC ACCACGTCGA CAGCGTGACG
ATCCGCGAAT CCTTCCAGGT GCAGGATTCC GTGATTCATC ACGGATTGTT CCTGTTGGCA
ACGGAACTGC GGCGTGATGA ATTCGGAGCG GCGCTCTACC GTGACGCGCT GGTCACTCAA
CTCTGTGTGC ATTTGCTGCG CCACCATGCC GAATCCCGTC TTCGGGCGCA CCGTCACCCA
GGCGCCCTGA ATGCCGCTCA GGCACAGCAG GTTACCGACT ACATCGAGCA CAATCTTGAC
TCCGACCTTT GCCTCAGCTC GCTCGCCCGC GTGGCCGGGC TGAGCCAGTA CCATTTCGCG
CGCCTGTTCA AGAAGCGGTT CGGCGCTCCG CCACATGCAT ACGTTCAACG GCGACGCATC
GAGCGTGCGC GTCACCTCGT CCTGCACAGC GACATGCCGC TCAAAGAGGT CGTGGGCGTG
ACCGGTTTCT GTGACCAGAG CCATCTGACG AGGGCCTTTC GGCGCGCGTT CGACATCACC
CCGGCCGAGT TACGGAGATC TTCCGACTAG
|
|---|
| Protein sequence | MDATGVDRRV PARLVLATRD GQLPGADLRV YQFHSHQTQV PPLRDIAVIG WQSRAQIALR
CGAIRSRAQM SPGDFSILRP GYESTWQWSR GFQATVLYLN ERRFADFASE VFDHHVDSVT
IRESFQVQDS VIHHGLFLLA TELRRDEFGA ALYRDALVTQ LCVHLLRHHA ESRLRAHRHP
GALNAAQAQQ VTDYIEHNLD SDLCLSSLAR VAGLSQYHFA RLFKKRFGAP PHAYVQRRRI
ERARHLVLHS DMPLKEVVGV TGFCDQSHLT RAFRRAFDIT PAELRRSSD
|
|---|
| |