| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3989 |
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| Symbol | |
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| ID | 4647598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 4263408 |
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| End bp | 4264238 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639807451 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_954772 |
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| Protein GI | 120404943 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.895984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC TGATTGGCAA GTGCGCCGTC GTCTCCGGCT CGGGACGCGG CATCGGCCGA
GAGATCGCCC TCAAACTCGC CGCCGAGGGC GCGTCGGTGG TGGTCAACGA CCTCGACGCC
GAACCCGCCC GTGAGACCGT CGCGGCCATC GAAGCCGCCG GCGGCAAAGC GGTTGCCTGC
GTCGGCAGCG TCACCGATTC CGACTTCGGT GAGCGGTTCG TCCAGACCGC GATGGACTCG
TTCGGCGGCC TCGACATCAT CGTCAACAAC GCCGGCTACA CCTGGGATTC GGTGATCCAG
AAGATGACCG ACGAGCAGTG GGACGCGATC CTCGACGTCC ACCTCAAGGC GCCGTTTCAC
ATCTTGCGCG CCGCGCAGCC GGTGATCAGC GGACTTGTCA AGCGCGCCAG GGAATCCGGC
GATCACGTCG GGTGCCGCAA GGTGGTCAAC ATCTCCTCGC TCGCCGGGGT GGGCGGCAAC
GCCGGGCAGG CGAACTATGC CGCGGCCAAG GCCGGTGTCA TCGGGCTCAC CAAGGCGCTG
GCCAAGGAGT GGGGTCGCTA CAACGTCACC GTCAACAGCG TGGCCTTCGG GTTGATCAAG
ACCAGACTGA CCGAGACGCC GGCCGACCGT CAGGGGACCA TCGACGTGGC AGGCCGGGAG
ATCAAGGTCG GGGTCAACCC AGGACTGCTC TCAGCCATGG AGCAGATGAT CCCCCTCGGC
CGTTCCGGCA CGCCCGCCGA GGCGGCCGGC GCGGTGTATC TGCTGTGCAC CCCGGAGTCG
GACTACATCA GCGCCCAAAC AGTGGTCTGC GGTGGCGGAT TCAACTTCTA A
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| Protein sequence | MKTLIGKCAV VSGSGRGIGR EIALKLAAEG ASVVVNDLDA EPARETVAAI EAAGGKAVAC
VGSVTDSDFG ERFVQTAMDS FGGLDIIVNN AGYTWDSVIQ KMTDEQWDAI LDVHLKAPFH
ILRAAQPVIS GLVKRARESG DHVGCRKVVN ISSLAGVGGN AGQANYAAAK AGVIGLTKAL
AKEWGRYNVT VNSVAFGLIK TRLTETPADR QGTIDVAGRE IKVGVNPGLL SAMEQMIPLG
RSGTPAEAAG AVYLLCTPES DYISAQTVVC GGGFNF
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