| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3982 |
|---|
| Symbol | |
|---|
| ID | 4647591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4256511 |
|---|
| End bp | 4257887 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639807444 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_954765 |
|---|
| Protein GI | 120404936 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCCGC GCCCGGGTGG ACCCCGTATC CACAACGCCT GGTGGACCGC GATCCTTCTG
GTGATGGTCG CTGTCTTCCT CGTGGTCACG GCCGGGGTCT ACAACGGTAG GTTCCGCGCC
TATGTGCCGG TCTCTTTGAC GTCGGACCGG TCCGGGCTGG TGATGGAGAC CGGCGCCAAG
GTCAAACTGC GCGGCGTCGA GGTCGGACGG GTCAAGAACA TCAGCGGCGG CGACGGCCCA
GCCAGACTGG AACTGGCCAT CTACCCCGAC CAGATCCAGT TCATTCCGGC CAATGTGCAG
GCACAGATCC AGGCCACCAC CGCCTTCGGT GCGAAGTTCG TCGACCTCGT GTATCCGGCC
GACCCGAGCC CGGACCGGCT TGCCGCCGGT GCGGTGTTGC GGTCCACCAA CGTCAGCACC
GAGGTCAACA CCATCTTCGA GAACCTGTCC GAGCTCCTGC AGATGATCGA CCCGGCGAAG
CTCAACGCGG TGCTGACCGC TGTGGCAGAC GGGGTTCGGG GCAAAGGCGA GCGGATGGGA
CAGGCTGCCA CCGACCTGAA CGTGGTCCTC ACCGCGCTCA ACGAACGCAA CGAGACGATC
CGGCAGGACT GGCGCTCGTT CAAGGACTTC AACGACACCT ACGCCACCGT CGCCTCCGAC
ATCATCACGA TCCTGGACGG TGCGAGCACG ACCAGCGCCA CCGTGGTCGA CCACGCCGAC
GAATTGGATG CGCTGCTGCT CAACACAATT GGTCTGACGC GGTCAGGAAC CGAGCTGCTT
GGGTCCAGCA AAGACAGCCT AGTCGGACTG GTCAGCACGC TCGAACCGAC GACCGGCCTG
CTGCACAAGT ACAGCCCGGT GTACACCTGC TGGCTGCAGG GGACGACCTG GTTCCTCGAC
AACGGGGGTT TCGATGTCTG GGGTGGGCGC AACGGACGCT CGATCGAACT CGACGTCGGC
CTTCTGTTCG GCAACGACCC CTACAAGTAT CCCGAAAACC TGCCCGTCAT CGCCGCAAAG
GGCGGTCCCG GCGGCCGGCC CGGGTGCGGA TCGCTGCCCG ACGCCACCAA GAACTTCCCG
GTCCGCCAGC TCATCACGAA CACCGGATGG GGCAGGGGGG TGGACATCCG GCCGAATCCC
GGTATCGGCC ATCCCTGTTG GGCGAACTAC TTCCCGGTGA CTCGTGCGAA TCCGGAGCCA
CCGAGTATCA GGCAGTGCCT GCCCGGTCCT GCGCCGGGGC CCATCCCATA CCCGGGGGCG
CCGCCCTACG GAGCACCTCT CTACGGCCCG GGCGGTGTAC CGCTGTTCCC AGGAGTGGCC
CCCGCCCCAC CCGCGCCACC CGCCGCGCTC GCGCCACCCG CGCCACCCGC CCCGTGA
|
|---|
| Protein sequence | MQPRPGGPRI HNAWWTAILL VMVAVFLVVT AGVYNGRFRA YVPVSLTSDR SGLVMETGAK
VKLRGVEVGR VKNISGGDGP ARLELAIYPD QIQFIPANVQ AQIQATTAFG AKFVDLVYPA
DPSPDRLAAG AVLRSTNVST EVNTIFENLS ELLQMIDPAK LNAVLTAVAD GVRGKGERMG
QAATDLNVVL TALNERNETI RQDWRSFKDF NDTYATVASD IITILDGAST TSATVVDHAD
ELDALLLNTI GLTRSGTELL GSSKDSLVGL VSTLEPTTGL LHKYSPVYTC WLQGTTWFLD
NGGFDVWGGR NGRSIELDVG LLFGNDPYKY PENLPVIAAK GGPGGRPGCG SLPDATKNFP
VRQLITNTGW GRGVDIRPNP GIGHPCWANY FPVTRANPEP PSIRQCLPGP APGPIPYPGA
PPYGAPLYGP GGVPLFPGVA PAPPAPPAAL APPAPPAP
|
|---|
| |