| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3922 |
|---|
| Symbol | |
|---|
| ID | 4645162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 4192439 |
|---|
| End bp | 4193272 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639807384 |
|---|
| Product | degV family protein |
|---|
| Protein accession | YP_954705 |
|---|
| Protein GI | 120404876 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.104164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCG TGGTGGTGAG CGACTCGTCG TCGCGCCTGC AGCCCGAGGT GCGTGCGCAG
TGGGACATCC GCGAAGTGCC GCTGCACGTC CTCGTCGACG GTGTCGACCT GCGCGACGGC
ATCGACGACA TTCCCTACGA CATCCACGAC CGGCCCAAGG TGACGACGGC GGGAGCGACA
CCCGCCGAAC TCGTCGAGAC CTACCGTCAG GCCCTCGCCG ACAGCGACGG TGCCGGTGTG
GTCGCGGTGC ACCTGTCGGC CGCACTGTCG AGCACCTACA GCGCGGCCAC GATGGCGGCC
CGCGAGTTCG GCCCGTCGGT GCGGGTGGTG AACTCGCGGT CCGCGGCGAT GGGCGTCGGT
TTCATCGCGC TGGCCGCGGC GGACTGCGCA CGCTCGGGAG GGGACATCGA CGCCGTCGAG
GCGGCGGCCC GGTCCGCGCT GACCCGCTCG CACGTGTTCC TCGTCGTGCA TCGGCTGGAC
AACCTGCGCC GCAGCGGACG GATCCGCACG GCCGCATCGT GGCTGGGTAC CGCGCTGGCG
CTCAAGCCGC TGCTGCGCCT GGACGTCGAC GGCCGGCTGG TGCTCGACCA GCGCATCCGC
ACGGTCGGCA AGGCCCATGC CGCGATGGTG GAACGCGTCG CCCAGGTGGT GGGCGACCGG
GGCGCCGACG TCGTGGTCCA CCACGTGGAC AACCATGACG CCGCCGACGA GCTCGGTGCG
GCGCTGACCC GGCGGCTGCC TCAGATCTCG TCACTGACCG TCGCCGACAT GGGGCCGCTG
CTGTCGATCC ACGTCGGCGG CGGAGCGGTG GGCGTGGCCG TGCAGGTGCA TTGA
|
|---|
| Protein sequence | MPVVVVSDSS SRLQPEVRAQ WDIREVPLHV LVDGVDLRDG IDDIPYDIHD RPKVTTAGAT
PAELVETYRQ ALADSDGAGV VAVHLSAALS STYSAATMAA REFGPSVRVV NSRSAAMGVG
FIALAAADCA RSGGDIDAVE AAARSALTRS HVFLVVHRLD NLRRSGRIRT AASWLGTALA
LKPLLRLDVD GRLVLDQRIR TVGKAHAAMV ERVAQVVGDR GADVVVHHVD NHDAADELGA
ALTRRLPQIS SLTVADMGPL LSIHVGGGAV GVAVQVH
|
|---|
| |