Gene Mvan_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3909 
Symbol 
ID4645149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4178731 
End bp4179570 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content67% 
IMG OID639807371 
Producttransglutaminase domain-containing protein 
Protein accessionYP_954692 
Protein GI120404863 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGGA TGCGGGTCGT GCATTCGACG GGGTATGCCT ACAAGTCGCC GGTCACCGCG 
TCGTTCAACG AGGCACGACT GACTCCGCGG TCGGACTCGC GGCAGAACGT GATCCTCAAC
CGGGTGGAGA CCGTGCCCGC GACGAGGTCG TACCGCTACG TCGACTACTG GGGCACCGCG
GTGACGGCCT TCGACCTGCA CGCGCCGCAC ACCGAGCTTG AGGTCACCGC GTCCTCGGTG
GTCGAGACGG ACCGGCCCGA GGAGCCGAAA ACCAAGGCTA CCTGGGCCGA TCTGGCGACC
GAAGCCGTGG TCGACAAGTA CGACGAGGTG CTCGCCCCGA CGCACTACGC GCCGTCGAGC
AAGCGCATCG AACGAGTCGG CCGGCGCATC GCGAAGTACC ACGAACCGGC CGAAGCGGTG
CTGGAGGCCG CGCGCTGGGT CCAGGGCGAG TTGCAGTACG TACCCGGCAC CACCGGCGTG
CACACGTCGG CCGTCGACGC GCTGCGCGAG GGTAAGGGCG TGTGCCAGGA CTTCGCACAT
CTGACGCTGA TGTTGTTGCG CGGCATGGGG ATCCCGTCGC GGTATGTGTC CGGCTACCTG
CACCCGAAGC GCAACGCGAA GATCGGCGAC ACCGTCGAGG GCCAGAGTCA CGCCTGGATC
CAGGCGTGGA CGGGGGAGTG GTGGCACTAC GACCCGACCA ACGACGCCGA CATCAACGAG
CAGTACATCA GCGTCGGTGT GGGGCGCGAC TATTCGGATG TCACCCCGCT CAAGGGCATC
TACTCCGGGG AGGGGTCCAC CGACCTCGAC GTCATCGTGG AGATCACCCG GCTGGCCTAG
 
Protein sequence
MWRMRVVHST GYAYKSPVTA SFNEARLTPR SDSRQNVILN RVETVPATRS YRYVDYWGTA 
VTAFDLHAPH TELEVTASSV VETDRPEEPK TKATWADLAT EAVVDKYDEV LAPTHYAPSS
KRIERVGRRI AKYHEPAEAV LEAARWVQGE LQYVPGTTGV HTSAVDALRE GKGVCQDFAH
LTLMLLRGMG IPSRYVSGYL HPKRNAKIGD TVEGQSHAWI QAWTGEWWHY DPTNDADINE
QYISVGVGRD YSDVTPLKGI YSGEGSTDLD VIVEITRLA