| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3894 |
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| Symbol | |
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| ID | 4647363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 4162852 |
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| End bp | 4164348 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639807358 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_954679 |
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| Protein GI | 120404850 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.484903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA TTTCCGCCTA CCAACAGCTC GGGTCGTATC GGGCTGCCGC AGCGGAGTGC
GGCACCACCC ATCGCACCGT GAAGAGGGTC GTCGACAAGT TCGAAGCCGA CCAGGCCGGC
GTGCGGCCGC CACCGCGGGC CGAACGGGCA CACAATTACG ACACCGTCTC GGGACTGGTC
GCCGAACGCG TGGACAAATC GAAGGGCCGG ATCTCGGCCA AGCGGCTGCT CCCGAAAGCA
CGCGCCGCCG GATACAGAGG TTCCGACCGT AACTTCCGAC GCCTCGTCGC GGAAGCGAAA
GCACTGTGGC GCAGTGAGAA TCATCGAGGT CGCCGTCCCG CGGTATGGGA ACCGGGTGAG
TATCTGGTGA TCGACTGGGC CCAGGCCGCG CCGGGATTGT TCTTGTTCTG CGCGGTGCTG
GCGTTCTCCC GCTGGCGGTT CGTGCGTTTC GCCGCCAATG AGCGGGCCTC GACCACGCTG
GCGTTGATCG CCGAGGCGCT GGCCGCGGCG GGGGGTGTGC CCGCGAAGGT GCTGGCCGAC
CGGATGGCCT GCCTCAAAGG AGGCGTGGTG GCCAACGTCG TGGTCCCCAC CCCGGACTAC
GTCCGGTTGG CCGGTCATTA CGGGTTCGCC CCGGATTTCT GTCACGCGAG CGATCCGCAT
TTCAAGGGCA TCGTGGAGAA CCTGTGCGGC TACGCCCAGG ACGATCTGGC CGTGCCGCTG
CTGACCGAGG CCGCCGTCAC CGCAACACCG ATCACGCTGC GTGCTGCGAA CGCCGCCGCC
GTGGCGTGGT GCGCCGAAGT CAACACAAGA GTGCATTCGG AGATCCACGC GATCCCCGAC
GAACGGCTGA TCGTCGAACG CGAACTGCTG CAACCACTCC CATCACTGCG ACTGCAGATC
GGGGCAGCGT CGGTGCTGCG CAAGGTCGAC CGGCTGTCGT GTGTCCGGTA CGGGTCGGCC
CGCTACTCGG TGCCGATGCG GTTGATCGGC ACCGCCGTAG CCGTGGTCGT CGACCACGGC
GCGATCGTCC TACTCGAGCC CGCCACCGGG GCGATCGTGG CAGAACACGA ACTCCTCGCC
CCCGGCGCAG TGTCGATCCT CGACGAGCAC TACGACGGAC CCCGGCCGGC GCCCAGTCGT
GGACCCCGGC CGAAGACCAC GGTGGAGAAG CAGTTCTGCG AGCTCGGTGA GGATGCTCAG
GCGTTCCTCA TCGGTGCCGC GGCGATCGGT AACACCCGAC TCGGGTCGGA GTTGGAGGTC
CTACTCGCCC TGGGTGCCGC CCACGGCACC GACGCCCTGA CCGCCGCCCT GCACCGGGCG
GTGGCGTTCC GCCGGTTCCG GGCCGCCGAT GTGCGGTCCA TCCTGGCCGT CGGGACCGGA
GCACCGCAGC CCCGCCCGGC CGGGGACGCG CTGATCCTGG ACCTACCAGT GGCCCCGACT
CGATCCCTGG ACGCCTACAA GTTCACCCCG GCCGTTGACG GCGAGGTGAT CCAGTGA
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| Protein sequence | MDIISAYQQL GSYRAAAAEC GTTHRTVKRV VDKFEADQAG VRPPPRAERA HNYDTVSGLV
AERVDKSKGR ISAKRLLPKA RAAGYRGSDR NFRRLVAEAK ALWRSENHRG RRPAVWEPGE
YLVIDWAQAA PGLFLFCAVL AFSRWRFVRF AANERASTTL ALIAEALAAA GGVPAKVLAD
RMACLKGGVV ANVVVPTPDY VRLAGHYGFA PDFCHASDPH FKGIVENLCG YAQDDLAVPL
LTEAAVTATP ITLRAANAAA VAWCAEVNTR VHSEIHAIPD ERLIVERELL QPLPSLRLQI
GAASVLRKVD RLSCVRYGSA RYSVPMRLIG TAVAVVVDHG AIVLLEPATG AIVAEHELLA
PGAVSILDEH YDGPRPAPSR GPRPKTTVEK QFCELGEDAQ AFLIGAAAIG NTRLGSELEV
LLALGAAHGT DALTAALHRA VAFRRFRAAD VRSILAVGTG APQPRPAGDA LILDLPVAPT
RSLDAYKFTP AVDGEVIQ
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