Gene Mvan_3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3890 
Symbol 
ID4647359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4160366 
End bp4160830 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content65% 
IMG OID639807354 
Producthypothetical protein 
Protein accessionYP_954675 
Protein GI120404846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.59783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.188854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGGG TCTTTGTTTG CCTCGATAGG ATCAAGCTAA TGAAACAAAT CGCCCTCGTC 
GTCAGTGCGC TCACTCTGCT ACTCGCCGCT TGCGGCGGCG GTAGCGAACA GTCGCCCGAG
ACGGTCACGG TGACCAGCAC TACGCAGGCT GCGCCGGCCT ACACTCCCCC GGCTCCGGTG
GCGCCGACAA AGCAGCAGGA AGTCGCTCCC GCACCAGAGG CGTCGTCGTG GACGATGCCC
AACCTCATCG GCCGGGACCT CCAGGCTGCT CAGGACGCCA TTCAGGCGTT GACGGACTAT
GCGATCGCGT TCAGCACGTC CACCGACCTC ACGGGTGCGG CGCGGGCGCA GTTGATGGAT
CGCAACTGGC AGGTGTGCTC GTCGAGTCCC CCAGCGGGGT CGACGCTGAC CGCAGGAACT
CCCGTCGATT TCGGCGTGGT CAAGATGTCG GAGCAGTGCC CATGA
 
Protein sequence
MGGVFVCLDR IKLMKQIALV VSALTLLLAA CGGGSEQSPE TVTVTSTTQA APAYTPPAPV 
APTKQQEVAP APEASSWTMP NLIGRDLQAA QDAIQALTDY AIAFSTSTDL TGAARAQLMD
RNWQVCSSSP PAGSTLTAGT PVDFGVVKMS EQCP