Gene Mvan_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3880 
Symbol 
ID4647349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4150750 
End bp4151436 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID639807346 
Producthypothetical protein 
Protein accessionYP_954667 
Protein GI120404838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.210738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCTTG CCGGGCTCGC GGTGTCACTG TGGGCGACCG CATGCACCAG CACCGTGGAC 
GGCACCGCGG TGCGGCCCGA CGCCGCCCCG TCGGCGGTGG CGGGCGTGCT GACCGAGCGT
GACCTCGATG CCGTGCTGCT CGACAGCGCC GAGATCGCCG CGCTGCTGAA CAGTCCCGAC
ATCGAGGTCA CCGACGAAAT CGACGAGATG ACCGACACTT CCGCCGATGT CTCCAACCCC
GAATGTCTCG GCGCGCTCTA CACCGCCGAA GACCCGGTGT ACGAGTCCAC CGGGTACACC
GCCGTGCTCA CCCGACTGGC CAGTGAGCCG GGTGACGACA ACGAACACTG GGTCGAAGAG
AGCGCGGTGC TGGTGCCGAC CGCCGAGGAC GCCGAGCAGT TCGTGGAGCG GTCGGCCCGC
GAGTGGGACG ACTGCGCGGG CCGGCAGGTC TCGATCAGCG ACGGCGAGGA GTGGTTCGAC
TGGGAGCTGG ACGCGGTGGT GCGGGACGGC GGGATGGTGA GCCAGCAGTC GACAATCCTG
GACTCGATCG ACTGGCAGTG TCAGCACACC GTCGTCTCCG TCTCGAACCT GATCATCGAG
GCGTCGGTGT GCGCCGAGCG CATCCACGAC GAGGCGACGA CGGTGGTGGC CGAGATGATC
GCCAAAGCTT CCGCGCGCAC GCGGTGA
 
Protein sequence
MALAGLAVSL WATACTSTVD GTAVRPDAAP SAVAGVLTER DLDAVLLDSA EIAALLNSPD 
IEVTDEIDEM TDTSADVSNP ECLGALYTAE DPVYESTGYT AVLTRLASEP GDDNEHWVEE
SAVLVPTAED AEQFVERSAR EWDDCAGRQV SISDGEEWFD WELDAVVRDG GMVSQQSTIL
DSIDWQCQHT VVSVSNLIIE ASVCAERIHD EATTVVAEMI AKASARTR