Gene Mvan_3861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3861 
Symbol 
ID4649178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4130594 
End bp4131592 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content70% 
IMG OID639807327 
Producthypothetical protein 
Protein accessionYP_954648 
Protein GI120404819 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.173043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.14179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC CGTGGGTCGT TGCCGCAGTC ACCGTCGCCT TGATCAGCCT GAGCGCCTTC 
TTCGTCGCGG TCGAGTTCGC GTTGATCGCC GCGCGGCGCA GCCGACTCGA AGACGCCGCG
GCCACCAGCG CCGCCGCCCG CGCCGCGCTA CGCAGCGCCG GCGAACTCTC GCTGCTGCTG
GCCGGCGCCC AGCTCGGTAT AACCGTGTGC ACACTGCTCC TCGGTGCGAT CACCAAACCC
GCTGTGCACC ACGCCATCAC ACCGCTCATC CGCGATCTGG GCGCCCCGGC ATGGGCGGCC
GACGTCGGCG GCTTCGTGCT GGCGTTGCTC ATCGTGACGT TCCTGCACCT GGTGGTCGGC
GAGATGGCGC CGAAGTCGTG GGCCATCGCC CATCCGGAAC GGTCCGCGAC GCTACTCGCC
CTGCCGATGC GCGGGTTCAT GTTCGTGACC CGACCCCTGC TGCGCGGGCT CAACGCCGCC
GCGAACTGGT GCCTGCGCCG CGTCGGCGTC ACGCCGGTGG ACGAACTGGC CGACACCCAG
GACCCCGACA CGCTGCGCCA GCTCGTCGAG CACTCGGCGA CCGTCGGCAC CCTCGACGAG
CGCTACCACG CCAACCTGAC CAGTGCGCTT GAACTGGAGG CGTTGACCGT CGGCCAGCTG
GCGCGCCGGG ACATGCGGTA CAGCGAAGTG CCCGCCGACG CGACTGCGGC GCAGATCCAG
GCAACCGCCA AAGCCACAGG CCATCTGCGG CTGCTGGTGC GCGACGGCAC CGCAACCGTC
GGCGTGCTCC ATGTGCGGGA CAGCCTGTCC AACACCGGCG CCGCGCGCGA TCTGATGAGG
CCGATCCTTG CGATGCCGGA GAACACGCCG GTCTACGAAG CCCTGCGCAC CATGCGGGAG
ACGCGCAACC ATCTTGTGGT GGTCGACGGC CCGTCGGGGC GCGGCCTGCT CACCCTGACG
GACCTGCTGT ACCGGCTGCT GCCGACGGAA GCGGCCTGA
 
Protein sequence
MSSPWVVAAV TVALISLSAF FVAVEFALIA ARRSRLEDAA ATSAAARAAL RSAGELSLLL 
AGAQLGITVC TLLLGAITKP AVHHAITPLI RDLGAPAWAA DVGGFVLALL IVTFLHLVVG
EMAPKSWAIA HPERSATLLA LPMRGFMFVT RPLLRGLNAA ANWCLRRVGV TPVDELADTQ
DPDTLRQLVE HSATVGTLDE RYHANLTSAL ELEALTVGQL ARRDMRYSEV PADATAAQIQ
ATAKATGHLR LLVRDGTATV GVLHVRDSLS NTGAARDLMR PILAMPENTP VYEALRTMRE
TRNHLVVVDG PSGRGLLTLT DLLYRLLPTE AA