Gene Mvan_3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3859 
Symbol 
ID4649176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4128443 
End bp4129147 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID639807325 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_954646 
Protein GI120404817 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.72846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0769538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTCA TCCTGACCGC GCACGGCAGT GCCGACCCAC GGTCGGCCCA GACGGCACGC 
GCGATCGTGG ACTGCATCCG ATGCCTGCGT CCGACGCTGG ACGCTCGAAT CGCGTTTTGC
GAGCAGAGTT CTCCGAATCT GCGTGACGAA CTCGCGGCGT TGCGCCGTCG GCAGGCGGTG
GTCGTCCCAT TGCTGCTTGC CGACGCGTAT CACGCGCGTG TCGACATCCC GGAGATGATC
GCCGCGTCCG GCGCCGACGT CCGTCAGGCC GGCGTGCTCG GCGAGGACGA CCGCCTGATC
CACGTGCTGC GGCAGCGCCT CGAGCACGCG GGGGTGTCAC GGCTGGATCC GAGCGTCGGT
GTCATCGTCA CGGCGGTCGG GTCGTCCCGC CCGGCCGCCA ATGTGCGTAC CGCCACGGTG
GCGCGTGAGC TGACGCTGAC GACGCGCTGG ACCGCGACGA CGGCGTTCGC CACCGGGCCG
CATCCGAGCC CGGCCGAGGC GGCCGACGAG TTGCGCCGTC GCGGCGCCAC CCGACTGGTC
ATCGCGCCCT GGTTTCTCGC GCACGGTCGG ATCACCGACC GCGTCGCAGA TTTCGCAGCG
GCCCAGCGCA TCCCGATGTC GGCGCCGCTG GGCGCGCACC GGCAGGTCGC CGAGACGGTG
CTGGACCGTT TCGACGCGGC GCTCGCGGTG CACGCGGCCG CCTGA
 
Protein sequence
MTLILTAHGS ADPRSAQTAR AIVDCIRCLR PTLDARIAFC EQSSPNLRDE LAALRRRQAV 
VVPLLLADAY HARVDIPEMI AASGADVRQA GVLGEDDRLI HVLRQRLEHA GVSRLDPSVG
VIVTAVGSSR PAANVRTATV ARELTLTTRW TATTAFATGP HPSPAEAADE LRRRGATRLV
IAPWFLAHGR ITDRVADFAA AQRIPMSAPL GAHRQVAETV LDRFDAALAV HAAA