Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3855 |
Symbol | |
ID | 4649172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4122828 |
End bp | 4124012 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639807321 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_954642 |
Protein GI | 120404813 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.33965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.277651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTCG ATGCCGCGGT CGCGGAGCTG CCTGAGCTGG CGGCAGGGAG GCGTCGTCCG TCGCAGCCTT TCGGGATCTA TGTCCACGTG CCGTTCTGCG CGGTGCGCTG CGGATACTGC GACTTCAACA CCTACACGCC CGCCGAACTG GGTGGCGCCA ACCCCGACGG CTGGCTGTCC GCGCTGCGCA CGGAGTTGCG GCTGGCCGCG GCACACCTCG GCGAACCGCC CGACGTGCAG ACCGTGTTCG TCGGAGGCGG TACCCCGTCG CTGCTGGGCG CGGCAGGTCT GACCGCTGTG CTCGACGCGA TACGCGAGGA CTTCACGCTG GCGCCCGGCG CCGAGGTCAC CACGGAGTCG AACCCGGAGT CCACCTCGCC CCGGTTCTTC GACGGGCTGC GGCGAGCCGG CTACACCCGG GTATCGCTGG GCATGCAGTC CACCGCGCCG CACGTGTTGG CTGCGCTGGA CCGCGTGCAT TCACCGGGCC GGGCGCTCGA CGCCGCACGG GAAGCCCGCG AGGCGGGCTT CGACCACGTC AACCTCGACC TCATCTACGG CACACCGGGG GAGACCGACG ACGACCTCGT AAGGTCGGCG AGCTCCGCCG TTGAAGCCGG CGTCGACCAC GTCTCGGCGT ACGCGCTGAT CGTCGAGGAC GGCACCGCGC TGGCCCGCCG GGTGCGGCGC GGCGAGATGC CGGCCCCCGA CGACGACGTG CTTGCGCGCC GCTACGAACT GCTCGACCGA CGGCTGGCTG ACGCCGGCTT CGACTGGTAC GAGGTGTCGA ACTGGAGCCG ACCCGGCGGG CAGTGCCGGC ACAACATCGG GTATTGGGAC GGCGGCGAAT GGTGGGGAGC CGGGCCGGGC GCGCACGGCT ATGTCGACTC CGTCCGGTGG TGGAACGTCA AGCACCCCAA CGCATATGCC GCAGCGTCGG ATAAAGGCGA GCTGCCGGTC GCCGACTTCG AGGCGTTGGA CGAACCGACC GCGCACATCG AGGACGTCAT GTTGAGGGTG CGGCTGCGCA CCGGCCTGCC CGCCGCGGCG CTCTCGGCGC CCGAGCGCCG GCGCGCCGAA CGGGCGGTCG CGGACGGTCT GCTGCGCACC GACGGGGATG CTCTGGTGCT CACCGACCGG GGCCGACTGC TCGCCGATGC CGTGGTGCGG GACCTGCTGG GCTGA
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Protein sequence | MGVDAAVAEL PELAAGRRRP SQPFGIYVHV PFCAVRCGYC DFNTYTPAEL GGANPDGWLS ALRTELRLAA AHLGEPPDVQ TVFVGGGTPS LLGAAGLTAV LDAIREDFTL APGAEVTTES NPESTSPRFF DGLRRAGYTR VSLGMQSTAP HVLAALDRVH SPGRALDAAR EAREAGFDHV NLDLIYGTPG ETDDDLVRSA SSAVEAGVDH VSAYALIVED GTALARRVRR GEMPAPDDDV LARRYELLDR RLADAGFDWY EVSNWSRPGG QCRHNIGYWD GGEWWGAGPG AHGYVDSVRW WNVKHPNAYA AASDKGELPV ADFEALDEPT AHIEDVMLRV RLRTGLPAAA LSAPERRRAE RAVADGLLRT DGDALVLTDR GRLLADAVVR DLLG
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