| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3852 |
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| Symbol | |
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| ID | 4649271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 4116304 |
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| End bp | 4121538 |
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| Gene Length | 5235 bp |
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| Protein Length | 1744 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639807318 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_954639 |
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| Protein GI | 120404810 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.534518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG CCGCATGGCG ATGCGCCCGG ACAGGCCCGG GTAGCTCCCT GTGCGCGAAT
TCGCTGTGTC AGGATGTCCG GCATGTCCGA CAGAAGCTTA GGCAAGGCTA TCCACACCGT
GCAGCCGCTT CCGTTGTGGC GCTGAGCGTC GCCGCGCCCG CCGCGCCGGT CGCCATCGTC
GGCATCGGCT GCCGACTCGC GGGCGACATC ACCACCCCGC GGGAGTTCTG GTCGTTCCTG
CTCACGGGTG GCAGCAAGGT CACCGAGGTC CCTTCGGAAC GGTGGGAGCC CTACCTGCAC
CGCGACCCGC GCAACGCGGC CCTGCTGCGG GAGACCACAC GGTGGGGCAC CTTTCTGGAC
GACCTGGCCG GCTTCGACGC CGAGTTCTTC GGGGTGTCGC CGCGCGAAGC CGAGCTGATG
GACCCGCAGC AGCGATTGGC GCTCGAGGTG TCCTGGGAGG CGCTCGAGCA TGCCGGCATC
TCGCCGCGGG CACTGGTCGG CAGCGACACC GCGGTGCTGA TGGGCGTGAA CTCCGACGAC
TACGGCAAGC TCCTGATGGA GGACATCGCC GGGATCGAGG CGTGGACCGG GATCGGCACG
TCGTTGTGCG GCGTCGCCAA CCGGGTGTCG CATCTGCTCG ACCTGCGCGG GCCCAGCGTC
GCGCTGGACG CGGCGTGCGC GGCCTCACTC GTCGCGGTCC ACCAGGCCTG CCAGTTGCTG
CGCGCCGGTG AGACGTCGCT GGCACTTGCG GGCGGTGTCA GCGCGTTGAT CGGTCCCGGG
CTGACCCGCG TGCTCGACGT CGCGGGCGCG ACGGCCCCCG ACGGCCGCTG CAAGACGTTC
GACGACGACG CCGACGGTTA CGGGCGCGGC GAGGGCGCGG CCGTGGTGGT GCTCAAGCTG
TTGGACGACG CAGTCCGCGA CGGTGACCGG GTGCTCGCCG TGGTGCGCGG CGGGGCGGTC
GCACAGGACG GCAGGACCGT CGGCATCATG TCGCCCAACG GGCAGGCCCA GGAGGACCTG
TTCCGGATCG CGTGCCGCGC CGCCGGTGTC ACACCGGCCA GTGTCGGCTA TCTCGAAGCC
CACGGAACCG GAACTCCCAC AGGCGATCCG GTCGAGATCG GCGCATTGTC CGCCGTCTAC
GGTCGGGGCC GTGCCGACAA CCCCTGTGCG GTCGGGTCGG TGAAACCCAA CACCGGGCAC
CTCGAAGGCG GCGCGGGCGT CGTCGGGCTG ATCAAGGCTG CCCTGGCGCT GCACCACGAG
CAACTGCCGC CCACCGCGGG CGTGCGCACG CTGACCACTG CCGTGGACTG GGCCGCCAGC
GGGCTGCGCG TGCCCACCGA GGCCGAGCCG TGGCCCCGCG CCGCCGAACC GCGCCGGGCC
GCGGTGTGCA GCTACGGCTA CGGCGGCACC ATCGCGCACG TTCTGCTCGA GGAGGCGCCA
CCGGCTCCAT CACGCGAAAC CGTCTCGGCG CAAATGTCGT TCATCCCGTT GTCGGCGCGC
TCGGAGGCCA GGCTCGCCGT GCAGGCCGGC GCGCTGGCCG GGCATCTGCG GCCGGCGGAC
TTCTCCGTCG ACGAACTCGC CGCGACGCTG TGGACCCGCC GTGGCCACGA ACCGGTGCGC
GCGGCGGTGC TCGTCGACGA CGGAGGCGTT GCCGACGGCC TCGACGCGCT GGCGACGCAG
CAGCGGGATC CGCGCGTGGT GACCGGCTCC GTCGTACCCG GCGCCGCCGA CGGCGCGGTG
TGGGTGTTCT CCGGACACGG GTCGCACTGG CCCGGAATGG GTCGTGAGCT GCTGGCCGGC
GAGCCGACGT TCGGTGCCGT CATCGACGAG GTCGACCAGG TGTTCCGCCG GGAGCTCGGG
TTCTCGGCGC GCGGCGCCCT GGCCTCCGGA GAGCTCGGCG GCACCGATCG GGTACAGGCG
CTCACCTTCG CGACGCAGGT CGGGCTCGCC GCGGTGCTTC GGGAGCGGGG AGTGGCGCCG
GCCGCGGTGA TCGGGCACTC GGTCGGCGAG GTCGCGGCCT GTGTCGTGGC CGGGGTGTTC
GACCTGGCGC ACGGCGCGTC GATCGCGTGC TACCGGGCGC GTGGTTTCCT GTCGGTGGCC
GGTGACGGTG CAATGGCGTT GGCGCGCTTA CCTTTCGACG AGGCCGAGCG CCGACTCGGT
GGGCGCACCG ATGTGGTGGC GGCCATCAGT GCGTCGACGG AGTCCACCGT GGTGTCCGGC
ACTGTCGCCG CTGTCGACGA GATCGTGGAG GCGTGGACGG CGTCGGGCGT CATGGTCCGC
CGGGTCAACA CCGACGTGGC CTTCCACAGT CCGGCGATGG ACGGGCTCAC CGGGGAACTC
GGGCGTCTCG TGGCGGCGTT GCCCGCGCCG GGTCGCGCCC GGGTGCCGCT GTACACGACC
GCGCTGGAGG ACCCGCGGTC CGAGGCCGCA CGCGACGAGC ACTACTGGGT GGCCAACCTG
CGTGGGCGGG TGCGCTTCGC CGAGGCCGTC GAGGCTGCCG CCCGGGACGG TCACCGGCTG
TTCCTCGAGG TGTCGGCGCA TCCGGTGGTG TCGCATTCGA TCGTCGAGAC GCTGACCAGC
CTCGGCATGG ACGACCATGC CGTGCTGCCG GTGCTGCGAC GTGATCAGCC GCAGCGACGT
GCGGTCGCCG CGGCGGTCGG TGCCCTCTAC TGCCACGGTG CGCCGGTCGC GCACGGGTTC
ACGGCGACGA TGCCGTGGGC CGCCGATCTG CCGGGCACGC AGTGGCAGCA CCGGCGGTTC
TGGCGCACCC CGACCCCGCC ACCGAACACC CGCGCGCTGC ACGACCCGTC GTCACACACC
CTGCTCGGCG GCGTCGTCGA CGTCACCGGC GAGGTGCCGG CCCGCGTCTG GCAGACCCGC
CTGGACATGG GCAGCCGCCC GTACCCGGGT GACCACCCCG TCCGCGAGAC CGAGATCGTC
CCTGCCGCAG TGCTTCTCAA CACATTCCTG ACCGCGGCAG GCTCGGGTCT GACCGACGTG
CGGCTGCGCA CACCGGTGCC TCCGGGTCGG GTCCGCGACA TCCAGGTGGT GCTGCAGGAC
GGCTCGTTGC GGATATCGTC GCGCCTGGCC GACGGCGGCG ACGGGAACGG GTGGCTCACC
CACAGCAGCG CCGTCGTCGC CACCGACGAG GACTTCGAGG GCGAACTCAA CGAACTGATG
GGCGGCGGTG TCGGCGCGGA CACCCAGGCG CGTTGTGCCG AACAGTTGCC GCCCGGACAT
GTCATCGACA CGCTCGCCGG TGTCGGTGTG GCGGCGATGG GATTCGGCTG GCAGGTGCTC
GACATCGGCC GTGGCGCAGG GGAACTGCTG CTGCGGGTCC GCGCCGAGGC GGACGGCTCG
ACACCGCGGA GCTGGGCCGG GTTGCTCGAC GCGGCGACCT CGGCGGCGTC CACGGTGTTC
GACGGGCCGC CCCGGTTGCG GATGCCCGCG CGGATCGAGC GGGTGCACGT GTGCGGCGAC
CCTCCCGCGG TCGCGCTGCT GCATGTGCGA CGGCGGCAGG GAACGGCCAC CGATGTCGCG
ATCGCCGACG AATCGGGAGC GGTGCGCGCC TCCATTACGG CGATGACGTT CGAGGAACTC
GAGAGCGCCA CCGGTGCCGA CCCCTCGCGG ATGCTGCACC ACGTGGCGTG GCATGTCACC
CCGTTCTGTG CGGACGACCG GCCCACCGAG GTCGCCGTGA TCGGTGGCGG CGTGGACATC
GACCCGGTCG TGCGGGATCT CTCCGATGCG GGTGTACCGC ATCGCGTCTA TGGGAGTCCG
GGGCAGGTGC CCGGGGACAC CGGAGAGCGG TCGGTGGTGC TGTTGCTGCC GCGGGACGAC
TCGCCGGAGG CTGCCGCCGA GCAGGTGCTG GATACTCTGA AACATCTCTG CGACAACAAT
TCTCAGGCCA GGCTGTGGGT GCTGACCAAC CGCGTGCACG AGGGCGGCAA CCTCGTGCAC
GCGCCGCTGT GGGGGATGTC GCGGATCGCC GCGGCCGAAC ACCCGCAGCT GTGGGGTGGG
GTGCTCGACG TCGCCTGCGG GGGAGTGCCC CTCGGTGTGC TCGCTTCGCT GCATGGCCAC
GGTGTCGTGG TGGCCCGCGA CGGCGTCGCG ATGACGGCGC GGCTGTCCCA TGCGCAATCC
GGCGGCGGCG CCCCGATGAC GTGCACGCCG GGCGGGACGT ATCTGGTCAC CGGCGGTACC
GGCGCGCTGG GCCTTCGGAT CGCGCAACGC CTCGCCGACC TCGGTGCGCG CCGCCTGGTG
CTGCTGTCCC GGTCGGGTTT GCCGCACCGC GACCAGTGGA CGGACAACCA GAGCGAGGCG
GTCCGCGCGG TGGCGGCGCT GGAGGAGCGC GGGGTGTCCG TGCACGTCGC CGCGATCGAC
ATCGGCGCGG CGGGTGCCGG CGATCAGCTG CGGGCGATGT TGCGGGAGCT GCCACCGGTG
AGAGGGGTCG TACACGCCGC AGGTGTGGAA GCCGGTGCGC TGCTGCTCGA TACGTCGGCG
GACGACATCC GGGCCGCGAT GCGGCCGAAG GTCGCGGGCA CGCTCATCCT GCACGAGCTG
TTCCCGCCCG AGCAGTTGGA CTGGATGGTG CTGTTCTCGT CGTGCGGCTA CCTCGCGGGC
TTCCCCGGGC AGGGGGCGTA TGCGTGCGCC AACGCGTTCC TGGATGCGAC TGCGCGGCAC
CGGTGCGCTC TGGGTGACCG CACCGTCAGC GTGGCGTGGA CTGCGTGGCG CGGTCTCGGC
ATGGGGTCGA CGTCCGGGTT CGTCGCCGCG CAGCTCGAAG CCTTGGGGAT GGGCACCGTC
GGCGCCGACG ACGCGATGCG GGCACTGGAC ACGGCGATGC GCGGTGAGGA GCCGAACGTC
GTTGTGCTGC CAGTGCTTCC GGGGGCCGCC GCGGTGCCGA TGCTGTCCGA CGTCGCGCCG
ACGGGTCGGG ATGACGACGA CGTCGCCCCG GTCGGGCCCG GTGATGCCGA TCTCGACGAA
TGGGTGGCGC GGGAGGTGGC CGCCGCGGTC GCCGCCGAAC TCGGCCTGCC GGAATCCGAG
GTCGATCCGC GGGTTCCGCT GGTGGAGGCC GGCGTCGACT CGATCATGAC CGTCGCGCTA
CGGCGCGCGC TGGAGAAACG CACGGGCCTG GCGCTGCCCC CGACGCTGCT GTGGGAGCAT
CCGACCGCCG CGGCGGTGAC CGACCGGATT GTCGAACTGC TCACGCCGCA CCCCGAAAAG
GCTGATATCA GCTGA
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| Protein sequence | MTDAAWRCAR TGPGSSLCAN SLCQDVRHVR QKLRQGYPHR AAASVVALSV AAPAAPVAIV
GIGCRLAGDI TTPREFWSFL LTGGSKVTEV PSERWEPYLH RDPRNAALLR ETTRWGTFLD
DLAGFDAEFF GVSPREAELM DPQQRLALEV SWEALEHAGI SPRALVGSDT AVLMGVNSDD
YGKLLMEDIA GIEAWTGIGT SLCGVANRVS HLLDLRGPSV ALDAACAASL VAVHQACQLL
RAGETSLALA GGVSALIGPG LTRVLDVAGA TAPDGRCKTF DDDADGYGRG EGAAVVVLKL
LDDAVRDGDR VLAVVRGGAV AQDGRTVGIM SPNGQAQEDL FRIACRAAGV TPASVGYLEA
HGTGTPTGDP VEIGALSAVY GRGRADNPCA VGSVKPNTGH LEGGAGVVGL IKAALALHHE
QLPPTAGVRT LTTAVDWAAS GLRVPTEAEP WPRAAEPRRA AVCSYGYGGT IAHVLLEEAP
PAPSRETVSA QMSFIPLSAR SEARLAVQAG ALAGHLRPAD FSVDELAATL WTRRGHEPVR
AAVLVDDGGV ADGLDALATQ QRDPRVVTGS VVPGAADGAV WVFSGHGSHW PGMGRELLAG
EPTFGAVIDE VDQVFRRELG FSARGALASG ELGGTDRVQA LTFATQVGLA AVLRERGVAP
AAVIGHSVGE VAACVVAGVF DLAHGASIAC YRARGFLSVA GDGAMALARL PFDEAERRLG
GRTDVVAAIS ASTESTVVSG TVAAVDEIVE AWTASGVMVR RVNTDVAFHS PAMDGLTGEL
GRLVAALPAP GRARVPLYTT ALEDPRSEAA RDEHYWVANL RGRVRFAEAV EAAARDGHRL
FLEVSAHPVV SHSIVETLTS LGMDDHAVLP VLRRDQPQRR AVAAAVGALY CHGAPVAHGF
TATMPWAADL PGTQWQHRRF WRTPTPPPNT RALHDPSSHT LLGGVVDVTG EVPARVWQTR
LDMGSRPYPG DHPVRETEIV PAAVLLNTFL TAAGSGLTDV RLRTPVPPGR VRDIQVVLQD
GSLRISSRLA DGGDGNGWLT HSSAVVATDE DFEGELNELM GGGVGADTQA RCAEQLPPGH
VIDTLAGVGV AAMGFGWQVL DIGRGAGELL LRVRAEADGS TPRSWAGLLD AATSAASTVF
DGPPRLRMPA RIERVHVCGD PPAVALLHVR RRQGTATDVA IADESGAVRA SITAMTFEEL
ESATGADPSR MLHHVAWHVT PFCADDRPTE VAVIGGGVDI DPVVRDLSDA GVPHRVYGSP
GQVPGDTGER SVVLLLPRDD SPEAAAEQVL DTLKHLCDNN SQARLWVLTN RVHEGGNLVH
APLWGMSRIA AAEHPQLWGG VLDVACGGVP LGVLASLHGH GVVVARDGVA MTARLSHAQS
GGGAPMTCTP GGTYLVTGGT GALGLRIAQR LADLGARRLV LLSRSGLPHR DQWTDNQSEA
VRAVAALEER GVSVHVAAID IGAAGAGDQL RAMLRELPPV RGVVHAAGVE AGALLLDTSA
DDIRAAMRPK VAGTLILHEL FPPEQLDWMV LFSSCGYLAG FPGQGAYACA NAFLDATARH
RCALGDRTVS VAWTAWRGLG MGSTSGFVAA QLEALGMGTV GADDAMRALD TAMRGEEPNV
VVLPVLPGAA AVPMLSDVAP TGRDDDDVAP VGPGDADLDE WVAREVAAAV AAELGLPESE
VDPRVPLVEA GVDSIMTVAL RRALEKRTGL ALPPTLLWEH PTAAAVTDRI VELLTPHPEK
ADIS
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