Gene Mvan_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3840 
Symbol 
ID4649259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4091738 
End bp4092925 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID639807306 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_954627 
Protein GI120404798 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.907566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC GAAGCCCCGC ACGTCGTTCG ACGATCCGGT GGCGTCTCAC AGTCCTGTAC 
GGAAGCGCGT TCTTCATCGC GGGCGCCGTC CTGATCTGCC TGATGTACGT CTTCCTGCAG
CAGTCGCTGC ACAACCGTCC GGCAGGTGCG CAGGGCGTGG TGAGTCAGTT CCTCGACGAC
CGCGGGGTGC GCAACCGGCC GGTTGTCGAG GGGCTCCTGC GTGCCGTCGC CACCGAGTCC
GAACGGGAAC GCCAGGACAC GCTGCGCGCC ATGTTGACGT GGTCGTTCGT CTCACTGGGC
GTCGTCGGCG TGGTGGCGGG CGGGTTCGGC TGGTTGATGG CTGGGCGTGC ACTTGCGCCG
CTGCAGGACG TCACCGCGAC GGCGCGCCGG GTCGCCGACC GGAATCTGCA CGAACGCATC
GCGCTGGACG GTCCCGACGA TGAGATCAAG GAACTCGCAG ACACTTTCGA CGCCATGCTG
GACCGCCTGG ACCGGGCCTT CGAGAGCCAA CGCCGGTTCG TCGCCAACGC CTCGCACGAG
CTGCGCACGC CGCTGGCGAT CAACCGGACC CTGATCGAGG TCGCCCTCGA GGATCCCGAA
GTCGCCGAGT CCACCCGCAC GCTCGGGCGG ACGCTGCTGG ACGTCAACCT CCGCAACGAA
CGCCTCATCG ACGGGCTGCT GGTGCTGGCG AGCAGCGACC AACAGCTGCG GCACCGGTCC
CGGGTCGATC TCGGAGAGGT CACCGGTCGC GCGTTGACGA CCGTAGCCGG ATTCGCACGC
GCCGCCGGGA TTCGTATCGA CTCCGATCTT CCCCAGGCGC ATGTCCACGG GGATGCGGCA
CTGCTCGAAC GACTGGCACA GAACCTGATC GACAATGCGC TGCGCTACAA CGTCCCGGAG
GACGGCTGGG TTTCGGTCAC GGTGGGGACC CAGGACGGGT TCGCCACACT GCGCGTCGAG
AACTCCGGCC CGGTCGTCGC CGCGGCCGAG ATTCCAGGCC TGTTCGAGCC GTTCAGGCGC
CTGGCCGCAG CCGACCGCGT GGCCGAAAGC CCGGCGCCGG GGCGCGGCGC AGGACTTGGG
CTGTCCATCG TCCGGTCGGT CGCGGTTGCG CACGGCGGCG ACGTCCGCGC CGAGGCCCGC
CCCGCCGGCG GGCTCGACGT GGCCGTCACG CTGACCGCGT GTCAGTAG
 
Protein sequence
MTPRSPARRS TIRWRLTVLY GSAFFIAGAV LICLMYVFLQ QSLHNRPAGA QGVVSQFLDD 
RGVRNRPVVE GLLRAVATES ERERQDTLRA MLTWSFVSLG VVGVVAGGFG WLMAGRALAP
LQDVTATARR VADRNLHERI ALDGPDDEIK ELADTFDAML DRLDRAFESQ RRFVANASHE
LRTPLAINRT LIEVALEDPE VAESTRTLGR TLLDVNLRNE RLIDGLLVLA SSDQQLRHRS
RVDLGEVTGR ALTTVAGFAR AAGIRIDSDL PQAHVHGDAA LLERLAQNLI DNALRYNVPE
DGWVSVTVGT QDGFATLRVE NSGPVVAAAE IPGLFEPFRR LAAADRVAES PAPGRGAGLG
LSIVRSVAVA HGGDVRAEAR PAGGLDVAVT LTACQ