Gene Mvan_3818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3818 
Symbol 
ID4645958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4070157 
End bp4071563 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content64% 
IMG OID639807284 
Productglycyl-tRNA synthetase 
Protein accessionYP_954605 
Protein GI120404776 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0423] Glycyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00389] glycyl-tRNA synthetase, dimeric type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.196425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.658755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCCGT CTTCCTCGAT CATCGACACC GTTGCAAACC TGGCCAAGCG GCGCGGGCTG 
GTGTTCCAGT CCGGCGAGAT CTACGGCGGC ACCAAGTCTG CCTGGGATTA CGGGCCGCTG
GGGGTGGAAC TCAAGGAGAA CATCAAGCGT CAGTGGTGGC GTGCGGTCGT CACCAGCCGT
GACGACGTCG TCGGTCTGGA CAGTGCGATC ATCCTCCCGC GCGAGGTGTG GGTGGCCTCC
GGCCACGTCG AGGTCTTCAA CGACCCGCTC GTGGAATGCC TGAACTGCCA TAAGCGGCAC
CGGCAAGACC ACATGCAGGA GGCTTACGCC GAAAAGGAAG CGAAGAAGGG CGTCACAGTA
GACCCCGACG CGGTGGCGAT GACCGAGATC GTCTGCCCCG ACTGCGGCAC CAAAGGTCAG
TGGACCGAAC CGCGCGACTT CAACATGATG CTCAAGACCT ACCTCGGCCC GATCGAGACC
GAGGAGGGTC TGCACTATCT GCGGCCCGAG ACTGCCCAGG GCATCTTCGT CAACTTCGCC
AACGTGGTGA CCACCGCCCG CAAGAAGCCG CCGTTCGGCA TCGGCCAGAT CGGCAAGAGC
TTCCGCAACG AGATCACCCC CGGCAACTTC ATCTTCCGCA CCCGCGAGTT CGAGCAGATG
GAGATGGAGT TCTTCGTCGA GCCGTCCACC GCGGCTGAAT GGCACCGGTA CTGGATCGAG
ACGCGCCTGC AGTGGTACGT CGATCTGGGC ATCAACCGCG ACAACCTGCG CCTCTACGAG
CACCCCAAGG AAAAGCTGTC GCACTACTCC GACGGCACCA CCGACATCGA GTACAAGTTC
GGTTTCGCCG GCAACCCGTG GGGTGAACTG GAAGGCATCG CCAACCGCAC CAACTTCGAC
TTGTCCACGC ACTCAAAGCA TTCCGGTGTG GACCTGTCGT TCTACGACCA GGCCAACGAC
ACCCGCTACG TGCCGTACGT GATCGAGCCG GCAGCCGGCC TGACCCGGTC GCTGATGGCG
TTCCTGGTCG ACGCCTACAC CGAGGATGAG GCCCCCAATG CCAAGGGCGG TGTCGACAAG
CGCACGGTGC TGCGGCTCGA TCCGCGGCTG GCGCCGGTCA AGGCGGCGGT GCTGCCGTTG
TCCCGGCACG CCGACCTGTC GCCGAAGGCC CGGGACCTGG CCGCCGAGTT GCGCCAGTCG
TGGAACGTGG AGTTCGACGA TGCCGGCGCG ATCGGTCGGC GCTACCGGCG CCAGGACGAG
ATCGGCACGC CGTACTGCAT CACATTCGAT TTCGATTCGC TGGAGGACCA CGCCGTCACC
ATCCGCGAGC GCGACGCGAT GACGCAGGAG CGGGTCGCGA TCTCGGAGGT TTCCAACTAC
CTCGCGGTGC GGCTCAAGGG CAGCTAG
 
Protein sequence
MAPSSSIIDT VANLAKRRGL VFQSGEIYGG TKSAWDYGPL GVELKENIKR QWWRAVVTSR 
DDVVGLDSAI ILPREVWVAS GHVEVFNDPL VECLNCHKRH RQDHMQEAYA EKEAKKGVTV
DPDAVAMTEI VCPDCGTKGQ WTEPRDFNMM LKTYLGPIET EEGLHYLRPE TAQGIFVNFA
NVVTTARKKP PFGIGQIGKS FRNEITPGNF IFRTREFEQM EMEFFVEPST AAEWHRYWIE
TRLQWYVDLG INRDNLRLYE HPKEKLSHYS DGTTDIEYKF GFAGNPWGEL EGIANRTNFD
LSTHSKHSGV DLSFYDQAND TRYVPYVIEP AAGLTRSLMA FLVDAYTEDE APNAKGGVDK
RTVLRLDPRL APVKAAVLPL SRHADLSPKA RDLAAELRQS WNVEFDDAGA IGRRYRRQDE
IGTPYCITFD FDSLEDHAVT IRERDAMTQE RVAISEVSNY LAVRLKGS