Gene Mvan_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3800 
Symbol 
ID4645488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4047927 
End bp4048580 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID639807264 
Producthypothetical protein 
Protein accessionYP_954587 
Protein GI120404758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0544747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.583558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGGC AGCACAGCAC GGCGGTCCCC GCCAGCCTCG CCGCGCGCCC CCTGCGCACC 
TTTCGAACCG GGCAGGCCAA GGGCGCCTAC GCATACCCGG GTCCCGAGAT CGCACGGCTC
CACGAACACG GCCTGCTCCA TCGCCTCGCC GACGGGTATT ACGCCGTTGT CCCGCAGGAG
ATGTTGGGTC GCAAATGGCT ACCAAACCTG GAGTCCGCCG CGGCGGGAAT CGCGACCGCC
ATCTACGGCT TCGACAACGT TGCGCTTATG GGCGTCAGCG CCGCACGTCT GCACGGCGTA
ATGCCGCGCG CGCTAGCAAC AGCAATCGTG GCCGTGCCGC GCCAACACCG CCCCATCAAG
CTCTCTGACC GGACCGCGAT CGTGCGGCTC GTCCAGCGCG AGACCGGCAG CCTGGACGCC
GAACGCATAG CCACCGAGCT GGGGCCGGCG CTGGTGACCA CGCCCGAACA GACGATCCTT
GACCTGGCCC ACCGCCCAAC CCTTGGCGAC AACGGAGCCG ACGTTCCTGA CGCCGTCGCC
GCCCTTTACT CGCGCAGCGA CAAGAAACGC CTTCAGCGCC TTGCCACCGA GCAGCGCCGA
CTGGCTTCCC TGCGCCGGGC CGAAGACTGG TCCAGGGTCG GCCATGGATC CTGA
 
Protein sequence
MGRQHSTAVP ASLAARPLRT FRTGQAKGAY AYPGPEIARL HEHGLLHRLA DGYYAVVPQE 
MLGRKWLPNL ESAAAGIATA IYGFDNVALM GVSAARLHGV MPRALATAIV AVPRQHRPIK
LSDRTAIVRL VQRETGSLDA ERIATELGPA LVTTPEQTIL DLAHRPTLGD NGADVPDAVA
ALYSRSDKKR LQRLATEQRR LASLRRAEDW SRVGHGS