Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3797 |
Symbol | |
ID | 4645485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4042485 |
End bp | 4044971 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639807261 |
Product | putative GAF sensor protein |
Protein accession | YP_954584 |
Protein GI | 120404755 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.818563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAC TTGTGGCGGC CCGCGACCAG ATGGAACGGC TGGTTCGGGT CATCGTCGCG ATCGGCGCCG ACCTGGACCT CGACGTGACC CTGCGCCGCA TCGTCACCGG GGCCAGAGAG CTCAGCGGAG CCCGGTACGG GGCGCTGGGA ATCCGAGGCG CCGACGGCAC GTGGGCGTCG TTCGTCTGCG ATGGGATGGA GGAGGACGCG GCCCGCGCGC TCGGTGGGCT CGCGGCCGGC GAGGGCATCC GCATCGACGA CCTGACCGGA TATTCCGGCG TCGCGGGGCT GCGTTCGCAG AAGACCCCGA TGCGGGCCCT GCTGGGCGTT CCGATCACGG TCCGGGGAGC GGATTTCGGC GCCCTCTACC TGGCCGACGA CCAGCCGGAC CGGGTGTTCT CCGACTCCCA GGAGGGGGCG GTACGGGCTC TGGCGACGGC AGCGGCCGCC GCCATCGACA ATGCGCGCCT GTTCGAGCGG GAACGCGAAT CGGCGAAATG GACGAAAGCC AGCCGTGAGA TCACCACCGC GCTGCTGTCC GGGGACCCGC AGACCGGGCC GCTGCAGCTG ATCGTGAACC TGGCGCTGGA GCTGGCCGAC GCCGAGCAGG CGATCCTGTT GGTGCCTGGA GAGCCCGACC TGCCCGGCGA CGAGGCCGAC ACCCTGGTGG TGGCCGCGAC GGCAGGCCGG TACGCCTCTG AGGTGATCGG GCGCCAGGTT CCGATGGACG GTTCCACCAC CGGCGGCGTC GCGCGGCGGG GTCTGCCGCT GATCACCGAC TCGTTCCAGT ACCCGATCGA GGGCTTCACC GATGCGGGGG AGCGCTCGGC CATCGTGATG CCGTTGATCG CCGACGAGGC GGTACTCGGG GTGATCGCCG TCGCGCGCCG CCCGCATCAG CCCCCCTTCG ACAACGACTA CCTCGAACTC GTCAGCGACT TCGCACGCCA CGCCGCCATC GCGTTGGCGC TGGCGGCCGG TCGTGAGCAC GCGCTCAATC AGGAACTCGC CCAGGCAGAT TCCGTCGATG CCGCCCTGCA CGCCGCGGCC GAGGAACTGC GCCGGCTGTG GCGGGCACGT CGGGTCCTCG CGGTGACCTT CCCGACCCAC GGCGACTCGG TGGAGTCGGC GCCGAAGGTC GTGGCGGTCG GCGAGGATAC GCACTGGGCC GACCTTTCCG CGCCGACCCG CCTGACGCTC AGTGCATTAC GCGACGGTGA CCTGCTTACG CCGAACACCG CGCAGCCCGG AACGGCGGGA ATCGCGATGC AGCATCCCGA AGGAATCCTC GTGGTGTGGC TCGATCTGAC CGATCAGCGC TCGTTCACTC TCGAAGACCA GACCCTGCTG ACGGTGCTCG CAGGTCGCCT CAGCCAGGGC CTGCAACGCG TGCACCGGGT GGACCAGCAG CGCGAGACCG CGCTGGCGCT GCAGCATGCC ATCCTCGGCC CCGCCGATCT GCCACACGGG TTCGCGGTCC GCTATCAGGC GGCCAGCAGG CCGTTGCAGG TCGGTGGCGA CTGGTACGAC GTCGTCGACC TGGACGACGG GCGCATCGCG ATGATCGTCG GCGATTGTGT CGGCCACGGC CTGCCCGCCG CGACGGTGAT GGGCCAGGTG CGCAGCGCAT GCCGCGCGCT GCTGTTCGAC AACCCCAGTC CCGCCGCGGC ACTCGCGGGA ATGGACCGGT TCGCGGCACG GCTTCCCGGC GCGCAATGCG CTACCGCGGT ATGTGCGGTG CTCGACCCCG CCACCGGCGA ACTCGTGTAT TCCAGTGCAG GACACCCGCC GCCGATCCTG ATGCACGCCG ACGGCAGCGC GCGGCTGCTC GAGGGTGCCC ACACCATCGC CCTTGGGCTA CGAGTCGGCT GGTCGAGGCC CGAAGGGCGG CTCAGCATTC CGGCAGGCGC CACGCTGATG CTCTATACCG ACGGCCTGGT CGAACGTCGA CGAACCTTGT TGGAGGACGG CATCTCTCGC GCCGCCGAGC TCCTGGAGGG CCATCGCACG TCGGACCTGG AGGATCTGGC GGACCAGATC ATGTCGGGTC TGGCCCCGAG CGTCGGCTAT CAGGACGACG TGGCCCTTCT GCTATACCGA CATCCCGCGC CGCTGCAGCT GAACTTCCCC GCGGATGCCA ACCATCTCGC ACCCGCTCGC GCCGCCCTGC GCAGCTGGTT GACCAGCGCC CGGGTTGAAC CTGCTCGGGT CATGGACGTC CTTGTCGCCG CCGGGGAAGC TCTCGCCAAC GCCATCGAAC ACGGTCACCG GCACACTCCG GACGGCACGG TGAGCCTGCG CGCGACCGCA CTGGTCGACC GGGTGCGGTT GACCGTCGCG GACACCGGGT CGTGGAAAGT TCCTCAGCCG GGCCGTGATT CGCGCCGAGG CCGGGGTATT GCGCTGATGC GCGCTCTCAT GCACGATGTC GAGATCGATA TCGGCCGTTC GGGAACCAGC GTTCATCTCG ACACGAGGAT CGACTGA
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Protein sequence | MDELVAARDQ MERLVRVIVA IGADLDLDVT LRRIVTGARE LSGARYGALG IRGADGTWAS FVCDGMEEDA ARALGGLAAG EGIRIDDLTG YSGVAGLRSQ KTPMRALLGV PITVRGADFG ALYLADDQPD RVFSDSQEGA VRALATAAAA AIDNARLFER ERESAKWTKA SREITTALLS GDPQTGPLQL IVNLALELAD AEQAILLVPG EPDLPGDEAD TLVVAATAGR YASEVIGRQV PMDGSTTGGV ARRGLPLITD SFQYPIEGFT DAGERSAIVM PLIADEAVLG VIAVARRPHQ PPFDNDYLEL VSDFARHAAI ALALAAGREH ALNQELAQAD SVDAALHAAA EELRRLWRAR RVLAVTFPTH GDSVESAPKV VAVGEDTHWA DLSAPTRLTL SALRDGDLLT PNTAQPGTAG IAMQHPEGIL VVWLDLTDQR SFTLEDQTLL TVLAGRLSQG LQRVHRVDQQ RETALALQHA ILGPADLPHG FAVRYQAASR PLQVGGDWYD VVDLDDGRIA MIVGDCVGHG LPAATVMGQV RSACRALLFD NPSPAAALAG MDRFAARLPG AQCATAVCAV LDPATGELVY SSAGHPPPIL MHADGSARLL EGAHTIALGL RVGWSRPEGR LSIPAGATLM LYTDGLVERR RTLLEDGISR AAELLEGHRT SDLEDLADQI MSGLAPSVGY QDDVALLLYR HPAPLQLNFP ADANHLAPAR AALRSWLTSA RVEPARVMDV LVAAGEALAN AIEHGHRHTP DGTVSLRATA LVDRVRLTVA DTGSWKVPQP GRDSRRGRGI ALMRALMHDV EIDIGRSGTS VHLDTRID
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