Gene Mvan_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3797 
Symbol 
ID4645485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4042485 
End bp4044971 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content70% 
IMG OID639807261 
Productputative GAF sensor protein 
Protein accessionYP_954584 
Protein GI120404755 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase)
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.818563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAC TTGTGGCGGC CCGCGACCAG ATGGAACGGC TGGTTCGGGT CATCGTCGCG 
ATCGGCGCCG ACCTGGACCT CGACGTGACC CTGCGCCGCA TCGTCACCGG GGCCAGAGAG
CTCAGCGGAG CCCGGTACGG GGCGCTGGGA ATCCGAGGCG CCGACGGCAC GTGGGCGTCG
TTCGTCTGCG ATGGGATGGA GGAGGACGCG GCCCGCGCGC TCGGTGGGCT CGCGGCCGGC
GAGGGCATCC GCATCGACGA CCTGACCGGA TATTCCGGCG TCGCGGGGCT GCGTTCGCAG
AAGACCCCGA TGCGGGCCCT GCTGGGCGTT CCGATCACGG TCCGGGGAGC GGATTTCGGC
GCCCTCTACC TGGCCGACGA CCAGCCGGAC CGGGTGTTCT CCGACTCCCA GGAGGGGGCG
GTACGGGCTC TGGCGACGGC AGCGGCCGCC GCCATCGACA ATGCGCGCCT GTTCGAGCGG
GAACGCGAAT CGGCGAAATG GACGAAAGCC AGCCGTGAGA TCACCACCGC GCTGCTGTCC
GGGGACCCGC AGACCGGGCC GCTGCAGCTG ATCGTGAACC TGGCGCTGGA GCTGGCCGAC
GCCGAGCAGG CGATCCTGTT GGTGCCTGGA GAGCCCGACC TGCCCGGCGA CGAGGCCGAC
ACCCTGGTGG TGGCCGCGAC GGCAGGCCGG TACGCCTCTG AGGTGATCGG GCGCCAGGTT
CCGATGGACG GTTCCACCAC CGGCGGCGTC GCGCGGCGGG GTCTGCCGCT GATCACCGAC
TCGTTCCAGT ACCCGATCGA GGGCTTCACC GATGCGGGGG AGCGCTCGGC CATCGTGATG
CCGTTGATCG CCGACGAGGC GGTACTCGGG GTGATCGCCG TCGCGCGCCG CCCGCATCAG
CCCCCCTTCG ACAACGACTA CCTCGAACTC GTCAGCGACT TCGCACGCCA CGCCGCCATC
GCGTTGGCGC TGGCGGCCGG TCGTGAGCAC GCGCTCAATC AGGAACTCGC CCAGGCAGAT
TCCGTCGATG CCGCCCTGCA CGCCGCGGCC GAGGAACTGC GCCGGCTGTG GCGGGCACGT
CGGGTCCTCG CGGTGACCTT CCCGACCCAC GGCGACTCGG TGGAGTCGGC GCCGAAGGTC
GTGGCGGTCG GCGAGGATAC GCACTGGGCC GACCTTTCCG CGCCGACCCG CCTGACGCTC
AGTGCATTAC GCGACGGTGA CCTGCTTACG CCGAACACCG CGCAGCCCGG AACGGCGGGA
ATCGCGATGC AGCATCCCGA AGGAATCCTC GTGGTGTGGC TCGATCTGAC CGATCAGCGC
TCGTTCACTC TCGAAGACCA GACCCTGCTG ACGGTGCTCG CAGGTCGCCT CAGCCAGGGC
CTGCAACGCG TGCACCGGGT GGACCAGCAG CGCGAGACCG CGCTGGCGCT GCAGCATGCC
ATCCTCGGCC CCGCCGATCT GCCACACGGG TTCGCGGTCC GCTATCAGGC GGCCAGCAGG
CCGTTGCAGG TCGGTGGCGA CTGGTACGAC GTCGTCGACC TGGACGACGG GCGCATCGCG
ATGATCGTCG GCGATTGTGT CGGCCACGGC CTGCCCGCCG CGACGGTGAT GGGCCAGGTG
CGCAGCGCAT GCCGCGCGCT GCTGTTCGAC AACCCCAGTC CCGCCGCGGC ACTCGCGGGA
ATGGACCGGT TCGCGGCACG GCTTCCCGGC GCGCAATGCG CTACCGCGGT ATGTGCGGTG
CTCGACCCCG CCACCGGCGA ACTCGTGTAT TCCAGTGCAG GACACCCGCC GCCGATCCTG
ATGCACGCCG ACGGCAGCGC GCGGCTGCTC GAGGGTGCCC ACACCATCGC CCTTGGGCTA
CGAGTCGGCT GGTCGAGGCC CGAAGGGCGG CTCAGCATTC CGGCAGGCGC CACGCTGATG
CTCTATACCG ACGGCCTGGT CGAACGTCGA CGAACCTTGT TGGAGGACGG CATCTCTCGC
GCCGCCGAGC TCCTGGAGGG CCATCGCACG TCGGACCTGG AGGATCTGGC GGACCAGATC
ATGTCGGGTC TGGCCCCGAG CGTCGGCTAT CAGGACGACG TGGCCCTTCT GCTATACCGA
CATCCCGCGC CGCTGCAGCT GAACTTCCCC GCGGATGCCA ACCATCTCGC ACCCGCTCGC
GCCGCCCTGC GCAGCTGGTT GACCAGCGCC CGGGTTGAAC CTGCTCGGGT CATGGACGTC
CTTGTCGCCG CCGGGGAAGC TCTCGCCAAC GCCATCGAAC ACGGTCACCG GCACACTCCG
GACGGCACGG TGAGCCTGCG CGCGACCGCA CTGGTCGACC GGGTGCGGTT GACCGTCGCG
GACACCGGGT CGTGGAAAGT TCCTCAGCCG GGCCGTGATT CGCGCCGAGG CCGGGGTATT
GCGCTGATGC GCGCTCTCAT GCACGATGTC GAGATCGATA TCGGCCGTTC GGGAACCAGC
GTTCATCTCG ACACGAGGAT CGACTGA
 
Protein sequence
MDELVAARDQ MERLVRVIVA IGADLDLDVT LRRIVTGARE LSGARYGALG IRGADGTWAS 
FVCDGMEEDA ARALGGLAAG EGIRIDDLTG YSGVAGLRSQ KTPMRALLGV PITVRGADFG
ALYLADDQPD RVFSDSQEGA VRALATAAAA AIDNARLFER ERESAKWTKA SREITTALLS
GDPQTGPLQL IVNLALELAD AEQAILLVPG EPDLPGDEAD TLVVAATAGR YASEVIGRQV
PMDGSTTGGV ARRGLPLITD SFQYPIEGFT DAGERSAIVM PLIADEAVLG VIAVARRPHQ
PPFDNDYLEL VSDFARHAAI ALALAAGREH ALNQELAQAD SVDAALHAAA EELRRLWRAR
RVLAVTFPTH GDSVESAPKV VAVGEDTHWA DLSAPTRLTL SALRDGDLLT PNTAQPGTAG
IAMQHPEGIL VVWLDLTDQR SFTLEDQTLL TVLAGRLSQG LQRVHRVDQQ RETALALQHA
ILGPADLPHG FAVRYQAASR PLQVGGDWYD VVDLDDGRIA MIVGDCVGHG LPAATVMGQV
RSACRALLFD NPSPAAALAG MDRFAARLPG AQCATAVCAV LDPATGELVY SSAGHPPPIL
MHADGSARLL EGAHTIALGL RVGWSRPEGR LSIPAGATLM LYTDGLVERR RTLLEDGISR
AAELLEGHRT SDLEDLADQI MSGLAPSVGY QDDVALLLYR HPAPLQLNFP ADANHLAPAR
AALRSWLTSA RVEPARVMDV LVAAGEALAN AIEHGHRHTP DGTVSLRATA LVDRVRLTVA
DTGSWKVPQP GRDSRRGRGI ALMRALMHDV EIDIGRSGTS VHLDTRID