Gene Mvan_3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3775 
Symbol 
ID4645138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4017180 
End bp4018064 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID639807240 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_954563 
Protein GI120404734 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.431042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.667573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CCGACCCGAA CGACACGCGC CTCTCGTCGT GGCGGCTGCT GGCGGGCAAC 
CCGGTCACGC TGGTGAGCGC GCTGGTGCTC GTCGCCGTGA CCGTCGTTGC GGTGACGGCG
AATTGGCTGG CACCGTACGG CGTCAACGAC GTCGACGTGC CGAATGCGCT TGCGCCGCCC
AGCGCTTCGC ACTGGTTCGG TACCGACGAA CTGGGCCGCG ACGTGTTGTC CCGGGTGTTG
GTGGCGGTTC AGGCGTCCAT GCGGATCGCC GCGGTGAGCG TGGCACTCGC CATGGTCGTC
GGTGTCGCGG TGGGGGTGGT CGCCGGCTAT CGCGGTGGCT GGCTGGACAC GGTGCTGATG
CGGGTGGTGG ACGTGATGTT CGCGTTCCCG GTGCTTCTGC TCGCGCTCGC CGTCGTCGCC
ATCCTCGGCC CCGGGGTGAC GACCACCATC CTGGCGATCG CCATCGTCTA CACGCCGATC
TTCGCGCGCG TGGCGCGTGC GAGCACGCTC GGGGTGCGCA CAGAACCGTA CGTGTCGGCG
TCACGCGCCA TGGGCACCGG CGACCTGTAC ATCCTGCGGC GACACATCCT CCCGAACATC
GCGGGCCCGC TGATCGTGCA GACGTCGCTG TCGCTTGCGT TCGCCATCCT GTCCGAGGCC
GCATTGTCGT TCCTGGGCTT GGGAATTCAG CCGCCGCAGC CATCGCTGGG CCGGATGATC
TTCGACTCGC AGGGGTTCGT GACGATGGCG TGGTGGATGG CGGTGTTCCC CGGCGCCGCG
ATCTTCGTGA TCGTGCTGGC GTTCAACCTG CTCGGCGACG GGCTGCGCGA CGTGCTGGAT
CCCAAGCAGC GCACCACGGT CGAGGCCCGC AGGAGGGAAC GATGA
 
Protein sequence
MTTTDPNDTR LSSWRLLAGN PVTLVSALVL VAVTVVAVTA NWLAPYGVND VDVPNALAPP 
SASHWFGTDE LGRDVLSRVL VAVQASMRIA AVSVALAMVV GVAVGVVAGY RGGWLDTVLM
RVVDVMFAFP VLLLALAVVA ILGPGVTTTI LAIAIVYTPI FARVARASTL GVRTEPYVSA
SRAMGTGDLY ILRRHILPNI AGPLIVQTSL SLAFAILSEA ALSFLGLGIQ PPQPSLGRMI
FDSQGFVTMA WWMAVFPGAA IFVIVLAFNL LGDGLRDVLD PKQRTTVEAR RRER