| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3774 |
|---|
| Symbol | |
|---|
| ID | 4645137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 4016221 |
|---|
| End bp | 4017183 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639807239 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_954562 |
|---|
| Protein GI | 120404733 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.542684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.67395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGG CCATGCCGGT CCTCCGGTTC GTCGCGCGCA GGCTGCTGTT CTCGGCGGTC
GTGATGATCG GTGTGCTGGT CGTGGTGTTC GCGTTGGTGC ACCTTGTGCC CGGCGACCCG
GTGCGCATCG CGCTGGGCAC CCGCTACACC CCCGAGGCCT ACGAGGCCCT GCGCGCCGCG
AGCGGTCTGG ACCGTCCGAT CGTCTCGCAG TTCTTCGGCT ACCTCGGGTC GGCGCTGACC
GGTGATCTCG GGGTCAGCTT CCGTAACGGC GACCCGGTGA CGCTGACGTT GCTGGAGCGT
CTGCCCGCCA CGCTCTCGCT CGGACTCGTC GGCATCGTCA TCGCGTTGGC GATCGCACTG
CCTGCCGGCA TCTACGCCGC GCTGAGGGAG GGCCGGCTCA GTGACGCGCT GGTCCGTATC
AGCAGCCAGT TCGGGGTGTC GATCCCGGAT TTCTGGATGG GCATCCTGTT GATCGCGCTT
TTCTCGACGG TGCTGGGGTG GCTGCCGACC TCCGGGTACC GGCCGTTGAC CGAGGACCCC
GCCGGGTGGC TCCGGCATGT CGTCCTGCCC GGGCTCACCG TCGGGGTGGT GGCCGCGGCG
ATCATGACCC GCTATGTGCG GTCGGCGGTG TTGGAGGTCG CCGCCATGGG TTACGTGCGC
ACGGCCCGGT CCAAAGGGCT CTCGCCGCGG ATCGTCACGT TCCGGCACAC GGTGCGCAAC
GCGCTGGTGC CGATCCTGAC CATCACCGGC ATTCAGCTGG CCACGCTGCT CGGCGGGGTG
ATCGTGGTCG AGGTGGTGTT CGCGTGGCCC GGACTGGGGC GGTTGGTGTT CAACGCGGTG
GCGGCCCGCG ACTATCCGCT GATCCAGGGC GCGGTACTCC TGATCGCCGC GCTGTTCCTG
GTGATCAACC TGCTCGTCGA CGTGTTGTAC GCCGTCGTGG ACCCGAGGAT CCGGTTGGGA
TGA
|
|---|
| Protein sequence | MSTAMPVLRF VARRLLFSAV VMIGVLVVVF ALVHLVPGDP VRIALGTRYT PEAYEALRAA
SGLDRPIVSQ FFGYLGSALT GDLGVSFRNG DPVTLTLLER LPATLSLGLV GIVIALAIAL
PAGIYAALRE GRLSDALVRI SSQFGVSIPD FWMGILLIAL FSTVLGWLPT SGYRPLTEDP
AGWLRHVVLP GLTVGVVAAA IMTRYVRSAV LEVAAMGYVR TARSKGLSPR IVTFRHTVRN
ALVPILTITG IQLATLLGGV IVVEVVFAWP GLGRLVFNAV AARDYPLIQG AVLLIAALFL
VINLLVDVLY AVVDPRIRLG
|
|---|
| |