Gene Mvan_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3713 
Symbol 
ID4643963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3947917 
End bp3948963 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content69% 
IMG OID639807180 
ProductNLP/P60 protein 
Protein accessionYP_954504 
Protein GI120404675 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.761513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATCG TGCTGGCACT GACTCTCGGC AACTCGGCGG GCATTGGGTG GGCCGACCCG 
GCTGCCGACG CCTTGGCTCG ATTGACGGAG CTCTCTCGAG AGGCCGAGCA GACCACGGAA
GCGGTGTATT CAGCCGAGCT GGACCTCGAG GCGAAACTCG CGGCGCAGCG CAGGGCCGAG
GATCGTCAAC GCGCCGAACT CGAGGCGATG ACCGCGGCGC GAGCCGACCT CGGCGAGTAT
CAGGCAGCTG TGAACCAGGT GGCGGCCGCG TCGTACATGG GTGGTTCGAC CAGCACGATC
AGCGCGGCGC TGACCGCGGA GTCTCCGCAA CGCCTGCTCG ACGAACTCTC GTCGAGCAGG
GTGATGGCCA CTCAGATGTC GGACCGCATC AAGGCCTTTC GCGCCGCGTC GACCCGTGCC
GACGACGCAG CGCGCGCCGC GCAGTCGTCG GCGCTGGCAG CTCGTACTGC CGCGGAGCAG
GCGTCAGCGG TCCGCGCAAG CCTGCAATCG AAGCAGAGTC GGCTGCGAAC ACAGATCGCC
GAAGTAGAGG CGCTATATCG CGCACTGACT CCCGATCAAC GCGCAGCGCT TGCCGATCCT
GGGCCGGTGC CGCCCGCGCC GCCGGTCCCG CCAGCGGCCA ACCCGGCCAT CATGGCGATG
CCCGAGGCGA TACCGCCGGT GGGGCCCGGT CCGTCCAGCT CACCCGAGGG GGCCGCGGTC
GTGCAGGCGG CGTTGACCCG TGTGGGTGCG CCCTATTCGT GGGGTGCGAC AGGACCAGAC
GCCTTCGACT GCTCGGGGCT CATCAAGTGG GCCTTTCTGC AGAACGGCAA ATCGCTCCCG
CGGTCGAGTC AGGCGCTCGC GGCGGGCGGA CAACCCGTGG CGACGACCGA GGTACAGCCC
GGCGACATAG TGACCTTCTA CTCGGACGCC TCACACGCGG GTATCTACAT CGGCGATGGG
AACATGGTGC ACGCCTCGAC GTACGGCACT CCGGTGAAGG TGGCGCCGAT CTCGTCGGCG
CCGATCTACA ACGTGCGCCG CTACTAG
 
Protein sequence
MAIVLALTLG NSAGIGWADP AADALARLTE LSREAEQTTE AVYSAELDLE AKLAAQRRAE 
DRQRAELEAM TAARADLGEY QAAVNQVAAA SYMGGSTSTI SAALTAESPQ RLLDELSSSR
VMATQMSDRI KAFRAASTRA DDAARAAQSS ALAARTAAEQ ASAVRASLQS KQSRLRTQIA
EVEALYRALT PDQRAALADP GPVPPAPPVP PAANPAIMAM PEAIPPVGPG PSSSPEGAAV
VQAALTRVGA PYSWGATGPD AFDCSGLIKW AFLQNGKSLP RSSQALAAGG QPVATTEVQP
GDIVTFYSDA SHAGIYIGDG NMVHASTYGT PVKVAPISSA PIYNVRRY