Gene Mvan_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3688 
Symbol 
ID4643740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3918844 
End bp3919590 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID639807156 
ProductNLP/P60 protein 
Protein accessionYP_954480 
Protein GI120404651 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCACC TGCCGGCGCT GACCGTTCCG ACCCGGCCAT CCGCATTGCG AGACTCGCTC 
GACGGCTCCC CGCAGATATC GCGACCGTTA TCTTGCTTTT GCTCGCATGT GCCACCGGTC
GCGTCGGCCC AACCTGCTGC CGGTCCCTGG GACCCCCTCC TTCCAAAGCT GCCGAGCGCA
GGCGCTCCCG GTGATCCGGT CGCCATCGCG AACGCATCGC TTCAGGCCAC GACTTTGGCG
ACGCAGACGG CGATGAATAT GGGTCGCAAC TTCCTCAGCA GCCTGGGAAT CGTCAGTCCT
GCCGCAGATC CGTCGACGAG CGTGCGCGGA AATCGCGTTA ATGGTCCCCA AGCGATCGAG
TACGTCATCC GCCGAGGGGG AACACAAATC GGTGTCCCCT ACTCCTGGGG TGGCGGAAGC
CTCACAGGCC CAACCCGCGG CGTCGACCAG GGAGCGGACA CCGTCGGCTT TGACTGTTCA
GGCCTTACGC GGTTCGCCTT CGCCGGCGTC GGAATGCTGC TGCCGCGATG GTCCGGCGAC
CAGTACGACG CCGGCCGAAA GGTTCCTCCC TCTCAGGCTA AACGCGGCGA CCTGTTGTTC
TGGGGGCCCG GCGGAAGTCA ACACGAAGCG ATCTACTTGG GCGGAGGACA GATGATCGAG
GCGCAACGAA CTGGCGTTCC CATCAAAGTC TCACCAGTGC GCCACGCTGG GATGACACCG
TACGTCGTAC GGATTATCGA GAGCTGA
 
Protein sequence
MKHLPALTVP TRPSALRDSL DGSPQISRPL SCFCSHVPPV ASAQPAAGPW DPLLPKLPSA 
GAPGDPVAIA NASLQATTLA TQTAMNMGRN FLSSLGIVSP AADPSTSVRG NRVNGPQAIE
YVIRRGGTQI GVPYSWGGGS LTGPTRGVDQ GADTVGFDCS GLTRFAFAGV GMLLPRWSGD
QYDAGRKVPP SQAKRGDLLF WGPGGSQHEA IYLGGGQMIE AQRTGVPIKV SPVRHAGMTP
YVVRIIES