Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3678 |
Symbol | |
ID | 4644376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 3908171 |
End bp | 3910561 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639807147 |
Product | copper-translocating P-type ATPase |
Protein accession | YP_954471 |
Protein GI | 120404642 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0521178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAGT CGACGATTCT CGACGTACAC GGATTGAACT GGGCAAGTTC GACGGCGGTG GTGGAGGCCA CTCTGCTTAG ACGTCCGGGC GTGACGTCGG TCGAAGCCAA TGCGGTAAAT CAAACGGCGA CAGTTGTTTA CGACCCGACG ACGACCTCGG TCGCTGACCT GGCCGGGTGG ATACGTGACT GCGGCTTCCA CTGCGCGGGG CGGTCGGTGC CAGACCACGT CTGCGATCCG ATGTCCGAGC CCCATCACCA CCCATCGGCC ACCCTGGACG AGCAGCCAAC GTCGGCTCCG TCGCCGACAG CCGGGGAGGT GCATGCGCAT GAGGCCGCGC CGGCACGAAC TCCGCAAGAA GCGATGGGTC ACGGCGGCGG ACACGCCGGC ATGTCGATGG ATCACATGGT CCGCGATATG CGCAACCGAT TCCTAGTAGC GCTCGCGTTG TCGATCCCGA TCATGCTGTG GTCGCCGATG GGCCGCGACA TGTTCGGGTT CACCGTGCCT GCGCCGTTCG GGCTCCGCGA TGACGTGTTC ACCCTGTTGC TGAGCCTGCC GGTCGTCTTC TACTCGGCGT GGATCTTCTT CGACGGTGCC TGGCGAGCGC TACGGGCCCG CACCTTGGAC ATGATGGTGC TCGTTGCCGT GGCGGTCGGC GCAGGCTGGC TCTACAGCCT CGGGGTGACG CTGACCGGCG GCGGTGAGGT GTTCTATGAG GCCGCCTCGG TGCTGACGGC GTTCGTCCTG TTGGGCCACT GGTTCGAGAT GCGAGCTCGC GGTGGCGCGA ACGATGCAAT TCGCACCCTG CTCGAGCTGG CGCCCCCGGT GGCAGTTGTG CTGCGCGACG GTGAGCCGGT GGAAACTCCC ACCGCCGAGG TGGCAGTGGG TGACCTCCTG CTCATCCGCC CAGGTGCCAA GATTCCCGTC GACGGCACGG TGGCCGAAGG AACGTCAGAC GTCGACGAGT CGATGGTCAC CGGGGAAAGC CTGCCGGTGT CAAAGGCGCC GGACTCGAAG GTGATTGGCG CCTCGATCAA CACCACCGGC ACGTTGCGGG TCCTGGCTAC GAAGGTCGGC TCCGACACGG TCTTGGCTCA GATCGTCGCG ATGGTTCAGG AAGCGCAGAA CTCCAAAGCC CCCGGGCAGC GGTTCGCCGA CCGGGCAGCG TTCTGGCTGG TTCTGGTGGC GCTGATCGGC GGCACTGCCA CCTTCCTAGT GTGGTGGGCG GTCGGCGCCG GTGTCCAGAC CGCGTTGCTG TTCGCCATCA CCGTCGTGGT CATCACCTGC CCCGATGCGC TGGGACTCGC GACTCCGACC GCGATCATGG TCGGCACCGG GTTGGGCGCC AAGCGGGGAG TGTTGTTCAA GAATGCGACC GCGCTGGAGA CGTCGGCGCG CATCGATACC GTCGTCATGG ACAAGACCGG CACGTTGACC AAGGGCGAGC CTGAAGTGAC CGACGTCGTC GTCGACGGCA TTCCAGAGGA TCAAGTACTC GCCATGGTGG CTGCGGTCGA AACTGAGTCC GAGCATCCGC TGGCGGGGGC GATCGTGCGT TACGCGGCCG CGCACGGGAT CGCTTCGGCG TCACTGACTG GTTTCCGTAA CGTGCCCGGT CACGGAGCTG TCGCGACGGT AGATGGGCGC CGCGTTGCCG TCGGCAATCG CAAGCTGATG GTCGAGGAGG ACGTCGAGTT CGGCGTGTTG ATGCAACGCC GCGACGAACT CGCCGCCAGC GGACGCACGG CGGTCTTGGT GGGCGTCGAC GGCCGGGGAG TCGGTGTCAT CGCCTTGGCG GACGCTGTGC GCGAGACGTC TGCCGAAGCG GTGTCCGCGC TGCACGACCT CGGTGTCGAG GTGGTCATGC TCAGTGGCGA CAATCAGGCC ACTGCCGATC GCATCGCCGC GCAACTGGGA ATCGACACGG TCATCGCCGA GGTGCTGCCA GGTGATAAGG CAGCCAAGAT CGCTGAATTG CAACGACAGG GCAAGAAGGT CGCCATGGTC GGCGACGGCG TCAACGACGC ACCGGCGCTC GCCCAAGCTG ATCTCGGCGT GGCGATCGGT GCAGGCACCG ACGTCGCCAT CGAAACCGCA GATCTGGTGT TAATGCGATC AGACCCGCTC GACGTCGCGA TCGCGCTGCA GATTGGACGG GGCACGCTAC GAAAGATGCG GCAGAACCTT GGATGGGCGG TCGGCTACAA CGTGATCGCA TTGCCCATCG CGGCTGGGGT TTTCGTACCT TCGCTCGGCT TGGTGCTGCG GCCCGAGATC GCTGCCCTCT CGATGTCAGG TTCCAGCTTC ATCGTGGCCG TCAATGCATT GATGCTGAAG AGATTGAAGC TTCCCGTACC GGCGTCAGCG GAGGCGGGCG CCAAGTCGTA A
|
Protein sequence | MTKSTILDVH GLNWASSTAV VEATLLRRPG VTSVEANAVN QTATVVYDPT TTSVADLAGW IRDCGFHCAG RSVPDHVCDP MSEPHHHPSA TLDEQPTSAP SPTAGEVHAH EAAPARTPQE AMGHGGGHAG MSMDHMVRDM RNRFLVALAL SIPIMLWSPM GRDMFGFTVP APFGLRDDVF TLLLSLPVVF YSAWIFFDGA WRALRARTLD MMVLVAVAVG AGWLYSLGVT LTGGGEVFYE AASVLTAFVL LGHWFEMRAR GGANDAIRTL LELAPPVAVV LRDGEPVETP TAEVAVGDLL LIRPGAKIPV DGTVAEGTSD VDESMVTGES LPVSKAPDSK VIGASINTTG TLRVLATKVG SDTVLAQIVA MVQEAQNSKA PGQRFADRAA FWLVLVALIG GTATFLVWWA VGAGVQTALL FAITVVVITC PDALGLATPT AIMVGTGLGA KRGVLFKNAT ALETSARIDT VVMDKTGTLT KGEPEVTDVV VDGIPEDQVL AMVAAVETES EHPLAGAIVR YAAAHGIASA SLTGFRNVPG HGAVATVDGR RVAVGNRKLM VEEDVEFGVL MQRRDELAAS GRTAVLVGVD GRGVGVIALA DAVRETSAEA VSALHDLGVE VVMLSGDNQA TADRIAAQLG IDTVIAEVLP GDKAAKIAEL QRQGKKVAMV GDGVNDAPAL AQADLGVAIG AGTDVAIETA DLVLMRSDPL DVAIALQIGR GTLRKMRQNL GWAVGYNVIA LPIAAGVFVP SLGLVLRPEI AALSMSGSSF IVAVNALMLK RLKLPVPASA EAGAKS
|
| |