| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3629 |
|---|
| Symbol | |
|---|
| ID | 4647195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3862007 |
|---|
| End bp | 3864559 |
|---|
| Gene Length | 2553 bp |
|---|
| Protein Length | 850 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639807102 |
|---|
| Product | diguanylate cyclase with PAS/PAC sensor |
|---|
| Protein accession | YP_954426 |
|---|
| Protein GI | 120404597 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.739626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTC TATCGCCCTC CGCGGTGGCG TTCTTGACGT TTCCGGTCGT CTACGCGGTG
TCGATCCTCG CCGGACGCGC CACCCGGTTG GGTGGCGGCG AGATCGCGCT GGTGTGGCCC
GCGGCCGCGG TGGCGACAGT GTGGCTGCTC GCGGCGCGGC GTTTCAGCAG GTGGCAGCGT
GTGGCCCACC TGTCGGCGCT AGCCCTCGCG ACGTTCGTGG TGAACCTCTT CACGCACGCC
ACGCCGCAGC TCAGCGCATG GTTCGTGCTG GTCAACCTTG CGCTCGCGCT GGTGACCGTC
GAGATCATTC ACTATCGCCG CGACGAGGTC GTCCTGCGTG ACCCCACGGA TCTGGTGCGG
GTCATCGTCG CGGTAACCGC CGGCACCGTG TGCGCGGCCG CCCTGGCGAC GATGTACCTG
GTGCCGGTCA CGGGTGCGCC GGCCTGGGAG ACGTTCGGGC TGTTCACGGC GCGAAACGGG
GCGACCGCGC TGATCGGTGT TGCGGCGTGG CTGCGGCTTC GTGACGTCAG GTGGACGCGC
CCACGCCTGT CGCCGGCAGC CACCGTCGAG ATCATCGTCA CGGGGGGTGT CGTCGGGTTC
GTCCTTGTGT GGATCTTCTG GTTGAGCACC GGGATTCCGC TGGGCTTCCT CGTGCTCCTG
CCGGCGATGT GGGTGGCGCT GCGGTACAGC ACCACGGTGA GCACCGTATT CCTGCTCGTG
GCTGCGGCGT GGATCATCTA CTCCACACTG TCCGGCAGGG GCGCGTTCAT CGTCCCCGAC
ATGCAGCTAC GTGCGCTGTT GGCGCAGGCC ATGGTGTTCA GCCTGACGGT GCTCGTGCTG
GCCCTGGCGC TGTTCCGCGA CTCGCGAATG CGCCTGATCG GCCAACTTGA GGCGGCGCGG
GATCGCGCGG ATCAGGACTC CGAACTGTTG GGCGCCGTGC TCGACAGCAT CCACGACAGC
GTGGTCCTCG CCGACCCGGA CGGTCGGGTG GTCCTGCAGA ACGCCCGGGC GACGGACTCG
GGCCTCGTCA GCGATGTCGT GTCGGCAGTG CATACGCCTG GCCTCGTCGA CGACATGGCT
GCGTCGGCAT CCCATGCCCC GCGTGACATC GTCGTCTCCG TCGAAGACTC ACGAATCCTC
GAACTGGCGA CGACCCCGCT CTCCCGGCAG TCACAGTTCA CCGTGATGGC GTTTCGCGAC
GTGACCGAGG AACGCAGAAA TGCCCGGGAA CTGCGCGAGG CACGCGACTT GTTCGCCGGG
GTCCTTGAGG CGGCGTCCGA GCAGGCGATC GTCGGCACCG ATCCGTCCGG CTGCATCACC
GTGTTCAACA ACGGCGCGGA GCGACTCCTC GGCTGGACCG AAGAGGAGAT GCTCGGCCGC
ACCCCGATGG ATTTTCACTA CCCGCCCGAG GTGCGCGCAA GGGCCGAAGA ACTGGGCATA
CCCGAAGGCT TCGAGGTCTT CGTCCACAAC GTCACGCCGG ACGCGGCGGA GATACGCGAG
TGGACCTTTG TGCGACGCGA CGGCGGCCAC GTCGATGTCA GCCTCGCGGT CTCCCTGATG
ACCGATGAGC GCGGCACCTG CGTGGGATAC ATCGGGGTGG CCACCGACAT CACCGACCAG
AAGGCCGCCG AACGTGCGCT GGCCGAAAGC GAGGAGAGGT TCCGGCTCGC GTTCGACACC
GCACCCGTCG GCATGTTCAT GTTCGATGTC ACCCCCGACG GCACCGGGCG GATCACCCGC
TGCAACACGA CCCTGGCCGA CTTCCTCGGC CGGTCGACAG CCGACGTGCT GGGGAGTTCG
ACCACCGAGC TCGGCGCCGA CGAAAGTACG TCCTCGACAA AAGGTTTGAC GGGACTCCCC
ACGCTGAGAA AAGGAGAGCC GTGGGGCGCA GAGGTGGCCT TTCGGCGAGC AGACGGCGCG
ACGGTGTGGG GCGCGGTGTC GGCCTCGCTC GTCGCTCCAC CGGGGGCCGA CCCGTACGGG
ATCTGCCTCG TCGAGGACAT CACGAGCCGC AAACGCGCCG AGGCCGACCT TCAGTTTCTG
GCCCTGCACG ATCCACTGAC CGGGCTGGCC AACCGCACAC TGTTGATGAA CCGGATGGAG
CAAGCACTCG CGGACGAAGG ACGTCACGTC CCCGGTCGTG TCGGACTGCT GTTTCTGGAC
CTCGACGGGT TCAAGCCGGT CAACGACACG TGGGGTCACG CGGCGGGCGA CGAGGTACTC
AAGGCGGTCG CTCGGCGGAT CGAGAACTCG ATCCGCCCGG GAGACACCGC CGCGCGGCTG
GGTGGCGACG AGTTCGCGGT GCTCTGCCCG GTGATCGGCG AAAACGGGGA ATTGCACGGC
GTTGCCGAAC GCATCCAGAC CGAGCTGAGC CGACCGCTCA CGTTGATCGG CGGACAGAGC
TACGACCAGC TCTCCGCGAG CGTCGGCGTG GCGATGTCGG GCTGCGGGCG CACCGCGGAG
GAACTCCTGC ACCACGCCGA CCGGTTGATG TATCACGCCA AACGACAGGG CAACGGCGGC
CTCGTCGGTG ATCACACTCC AGCGGGAGCA TGA
|
|---|
| Protein sequence | MKRLSPSAVA FLTFPVVYAV SILAGRATRL GGGEIALVWP AAAVATVWLL AARRFSRWQR
VAHLSALALA TFVVNLFTHA TPQLSAWFVL VNLALALVTV EIIHYRRDEV VLRDPTDLVR
VIVAVTAGTV CAAALATMYL VPVTGAPAWE TFGLFTARNG ATALIGVAAW LRLRDVRWTR
PRLSPAATVE IIVTGGVVGF VLVWIFWLST GIPLGFLVLL PAMWVALRYS TTVSTVFLLV
AAAWIIYSTL SGRGAFIVPD MQLRALLAQA MVFSLTVLVL ALALFRDSRM RLIGQLEAAR
DRADQDSELL GAVLDSIHDS VVLADPDGRV VLQNARATDS GLVSDVVSAV HTPGLVDDMA
ASASHAPRDI VVSVEDSRIL ELATTPLSRQ SQFTVMAFRD VTEERRNARE LREARDLFAG
VLEAASEQAI VGTDPSGCIT VFNNGAERLL GWTEEEMLGR TPMDFHYPPE VRARAEELGI
PEGFEVFVHN VTPDAAEIRE WTFVRRDGGH VDVSLAVSLM TDERGTCVGY IGVATDITDQ
KAAERALAES EERFRLAFDT APVGMFMFDV TPDGTGRITR CNTTLADFLG RSTADVLGSS
TTELGADEST SSTKGLTGLP TLRKGEPWGA EVAFRRADGA TVWGAVSASL VAPPGADPYG
ICLVEDITSR KRAEADLQFL ALHDPLTGLA NRTLLMNRME QALADEGRHV PGRVGLLFLD
LDGFKPVNDT WGHAAGDEVL KAVARRIENS IRPGDTAARL GGDEFAVLCP VIGENGELHG
VAERIQTELS RPLTLIGGQS YDQLSASVGV AMSGCGRTAE ELLHHADRLM YHAKRQGNGG
LVGDHTPAGA
|
|---|
| |