| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3624 |
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| Symbol | cobD |
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| ID | 4647190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 3855396 |
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| End bp | 3856349 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639807097 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_954421 |
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| Protein GI | 120404592 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.69655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGCTC GCGGAATCGG CATGGCCGCA GGGGTGGCGG CCGACCTGGC GTTCGGGGAC
CCGAGGCGGG GTCATCCGGT GGCGCTCTTC GGTGGCGCTG CAGCGGCTTT GGAGCGCTAC
ACCTACGCCG ACGACCGTCG TGCAGGCGCG CTGCACACCG CGGCGCTTCT GACCGGCGTC
GGCGTCGCCG CGGCGGTCGT GCAGCAGGCT GGGCGGCGCC GTGGAGTGCC TGCCGAGGCG
GCATGCGTCG CGGCGGCGAC GTTTATCGCG GCCGGCGGCA CGACGCTGAG CCGCACCGGG
GAGCAGATGG TGCGACTGCT GCGTGCCTCC GACGTCGAGG GCGCCCGCCG GCTGCTGCCG
TCGCTGTGTG GGCGCGACCC GTCGGTGCTC GACGCGGCAG GGCTGACGCG GGCGGCGCTG
GAATCGATCG CCGAGAACAC CTCGGACGCC CAGATCGGCC CTTTGGTGTG GGCGGCGGTG
GGCGGCGCTC CCGCGGTGCT GGTGTACCGC GCCGCCAACA CGCTGGACGC GATGATCGGC
AACCGGTCCC CGCGGTACGC GCGATTCGGT TGGGCCGCCG CCAGATTCGA CGACCTGCTC
AACCTGGCCC CGGCGCGGCT GACAGGTGTG CTTGCCGTGG TGTGCGCGCC GGTGGTCGGC
GGGTCACCCG CCGAGGCATG GCGTGTGTGG CAACGCGATG CGCGCAAACA CCCGAGCCCC
AATGCCGGCG TCGCCGAGGC GTCGTTCGCC GGGGCGCTCG GTGTCCGGCT CGGCGGGCCC
ACGCAGTACG CCTATGAGCT GGAGATCCGA CCGACGCTCG GTGACGGGCG GACCCCCGAT
GTCGACGACC TGGCGCGGGC GGTGCGACTG TCGCGGGCGG TGCAACTGCT CGCGGCCGTG
GTGGCGATCA GCGTCGCTTG CCGTAGCGGT CGGCGAGTTT CTGCTCGGTA CTGA
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| Protein sequence | MFARGIGMAA GVAADLAFGD PRRGHPVALF GGAAAALERY TYADDRRAGA LHTAALLTGV
GVAAAVVQQA GRRRGVPAEA ACVAAATFIA AGGTTLSRTG EQMVRLLRAS DVEGARRLLP
SLCGRDPSVL DAAGLTRAAL ESIAENTSDA QIGPLVWAAV GGAPAVLVYR AANTLDAMIG
NRSPRYARFG WAAARFDDLL NLAPARLTGV LAVVCAPVVG GSPAEAWRVW QRDARKHPSP
NAGVAEASFA GALGVRLGGP TQYAYELEIR PTLGDGRTPD VDDLARAVRL SRAVQLLAAV
VAISVACRSG RRVSARY
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