Gene Mvan_3622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3622 
Symbol 
ID4647188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3854103 
End bp3854597 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content68% 
IMG OID639807095 
Productprotein tyrosine phosphatase 
Protein accessionYP_954419 
Protein GI120404590 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.27551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGAGC TGTTGCACGT GACGTTCATC TGCTCCGGCA ACATCTGCCG GAGCCCGATG 
GCGGAGAAGA TGTTCGCCCA CCAGATCGGC GAGCGCGGGC TGGCGCATGT CGTCCGGGTG
ACCAGCGCGG GTACCGGCCA CTGGCACGAG GGCGAACCCG CCGACCGGCG CGCCGGTCAC
GTGCTGCGGG CGCACGGCTA TCCGTCCTCG CACCGCGCCA CCCAGATCAA CGACGACCAC
CTGGCCGCCG ACCTCGTCGT GGCATTGGGC CGCAACCATC AGCGGATGCT GCAGCACATG
GGGGTGCCCG CGGAACGACT GCGGATGCTG CGGTCGTTCG ACCCAAGATC GGGGGCGCAC
GTCCTCGACG TGGAAGATCC GTATTACGGC ACCCACGACG ATTTCGAGGA CGTATTCACG
GTGATCGACG CGGCGCTGCC AGGCCTGCAC GGCTGGGTCG ACGAGCGGTT GGCCGACCGG
GAACAGGTCG GTTGA
 
Protein sequence
MSELLHVTFI CSGNICRSPM AEKMFAHQIG ERGLAHVVRV TSAGTGHWHE GEPADRRAGH 
VLRAHGYPSS HRATQINDDH LAADLVVALG RNHQRMLQHM GVPAERLRML RSFDPRSGAH
VLDVEDPYYG THDDFEDVFT VIDAALPGLH GWVDERLADR EQVG