Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_3612 |
Symbol | |
ID | 4647178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 3845880 |
End bp | 3846314 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639807085 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_954409 |
Protein GI | 120404580 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.812981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCTC CCGCCCGCTA TCTGATGCGG GCCAAGGACC TGGTCGACGC GCGCTATTCC GAGCCGATCA CCGTCGACGA TCTGGCGGCC GCCGCCGGCC TGTCCCGCGC CCATTTCAGC CGGATGTTCA GCAAGACGTT CGGCGAGTCC CCGCGCGCCT ACCTACAGAC CCGCCGGCTG GAGCGCGCCG CGTCGCTGTT GCGCCACACC GACCGGTCGG TGGCCGACAT CTGCGTGATG GTCGGACTGC AGAGCGTCGG GTCGTTCACC ACCAGCTTCG CGCGCACCTA CGGTATGCCG CCGGCGGCAT ACCGGGCGTC GATGCCGCCC GCGGCCGTCC ACGCGCGGAT ACCGAGCTGC ATCCTGCAGC GCGATACCCG CCCGAAGGCC GACACCCGCG TCGACAAGAC AGCACACGGG GAGAAGACGG GCTGA
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Protein sequence | MLPPARYLMR AKDLVDARYS EPITVDDLAA AAGLSRAHFS RMFSKTFGES PRAYLQTRRL ERAASLLRHT DRSVADICVM VGLQSVGSFT TSFARTYGMP PAAYRASMPP AAVHARIPSC ILQRDTRPKA DTRVDKTAHG EKTG
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