Gene Mvan_3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3600 
Symbol 
ID4647165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3833218 
End bp3834768 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content69% 
IMG OID639807074 
ProductTAP domain-containing protein 
Protein accessionYP_954398 
Protein GI120404569 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.601455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAT GTGGTGCCAT GAAGCTCAAG ACCGGGGTCG CACGATCCGG CCTTCTCCTC 
TCCCTGGCCG TGCTGCTGGT CGCCGGCTGC AGCCAGGTGG TGGCCGGACG CGCGTTGATC
TCGGTCCCCC GGCCGGGCAC ACCCATCGAA TGGGGGCCCT GTGAGGCCGG ACCGTCCGAC
CAGGTGCGCA TCCCGCCCGG CGCCGAATGC GGCATGCTCT CGGTGCCCGT CGACTGGGTC
CGCGCCGACG CCCCCGACGG CGAAGTCGCC CAGATCGCGG TGCTGCGGAT CAAGGCGGCC
GGAGAGAAGA TCGGGTCCCT GATCATCAAC CCGGGCGGGC CCGGCAAGTC GGGCAAGGAA
TCGGCTGCCG TCATGGCCCC GACGCTGCCC GAGGAGGTGC GTCAGCGGTT CGACCTGGTG
GGCTTCGATC CGCGCGGGGT GGCCGAGTCC ACCCCTGCGG TGCGGTGCAA CAGCGACGCC
GACCACGACC GGTTGCGCGC CGACAACGTC GTCGAGTACA CCCCCGAGGG CGTGGCACAT
CTGGAGAACC TCACCAAGGA GTTCGTGCAG CGCTGCGTCG ACAAGATGGG CACCGACTTC
CTCAGCAATG TCGGAACCGA AAGTGTGGTC AAGGATCTCG ACGCGTTGCG GGCCGCACTC
GGCGACGAGA AGCTGACGTT CCTCGGCTAC TCCTACGGCA CCCGCATCGG TGCGGGCTAC
GCCGAGGAAT ACCCGCAGAA CGTGCGCGCG ATGATTCTCG ACGGCGCCAT CGACCCCAAC
GCCGACCCGG TCGAGGCCGA CGTCCGCCAG GCCGCGGCGT TCCAGCAGGC GTTCGACGAC
TACGCCACCG ACTGCGCGAT CGACGAGGAC TGCCCGCTGG GCACCGACCC GGCCAAGGCG
GTCGACGTGT ACCGGTCGCT GGTGTGGCCG CTGGTCGACG CGCCGGCAGA CACCACCGAC
CCGCGCGGCC TCAGCTACAA CGACGCCGTC GTCGGCACCA TCCTGCCGCT GTACTCGCCG
GGGCTGTGGC GGCACCTGAC CCAGGCGCTG ACAGAGATCA AGAAGGGCCG TGGCGACACG
ATGCTCGCGC TGTCCGACCT GTATATGGGC AGGGACGCCC AGGGGCACTA CAGCAACGAC
ACCGATTCGC GCGTCGCGGT CAACTGCGTG GACAAGCCCG CAATCACCGA CCGGGCCACC
CTTGTCGAGC AGGACCGGCG GGTGCGTGAG GCCGCGCCGT TCATGGCATA CGGGGAATTC
ACCGGATTGG CCCCGATGAC GACGTGCGGG TTCTGGCCGG TGCCGCCGAC GAGCGTCCCG
CACGAGCTCG ACGTCAGCGG GTTGCCGCCG ATCCTGGTCA TCTCGACGAC CAACGATCCG
GCCACCCCGT ACCAGGCCGG CGTCGATCTG GCCCGTCAGC TCGACGGCAC CCTGGTGACG
TTCGAGGGCA CCCAGCACAC CGTTTCGTTG CAAGGTGATT CGTGTATCGA CGACATCGCC
GTTCGTTACC TGGTCGACGT GACCGTTCCG CCTCCGGACA CCCGGTGCTG A
 
Protein sequence
MAACGAMKLK TGVARSGLLL SLAVLLVAGC SQVVAGRALI SVPRPGTPIE WGPCEAGPSD 
QVRIPPGAEC GMLSVPVDWV RADAPDGEVA QIAVLRIKAA GEKIGSLIIN PGGPGKSGKE
SAAVMAPTLP EEVRQRFDLV GFDPRGVAES TPAVRCNSDA DHDRLRADNV VEYTPEGVAH
LENLTKEFVQ RCVDKMGTDF LSNVGTESVV KDLDALRAAL GDEKLTFLGY SYGTRIGAGY
AEEYPQNVRA MILDGAIDPN ADPVEADVRQ AAAFQQAFDD YATDCAIDED CPLGTDPAKA
VDVYRSLVWP LVDAPADTTD PRGLSYNDAV VGTILPLYSP GLWRHLTQAL TEIKKGRGDT
MLALSDLYMG RDAQGHYSND TDSRVAVNCV DKPAITDRAT LVEQDRRVRE AAPFMAYGEF
TGLAPMTTCG FWPVPPTSVP HELDVSGLPP ILVISTTNDP ATPYQAGVDL ARQLDGTLVT
FEGTQHTVSL QGDSCIDDIA VRYLVDVTVP PPDTRC