| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3579 |
|---|
| Symbol | |
|---|
| ID | 4644426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3806645 |
|---|
| End bp | 3808387 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639807055 |
|---|
| Product | dihydrolipoamide acetyltransferase |
|---|
| Protein accession | YP_954379 |
|---|
| Protein GI | 120404550 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.561749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0628268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCT CCGTCCAGAT GCCCGCACTC GGAGAGAGCG TTACCGAGGG GACAGTCACC
CGCTGGCTGA AGCAAGAGGG AGACACGGTC GAGGAGGACG AGCCGTTGCT GGAGGTGTCA
ACCGACAAGG TCGACACCGA GATCCCCTCA CCCGCCGCGG GTGTGCTGAA GAAGATCGTC
GCCCAGGAAG ACGACACCGT CGAGGTCGGT GGTGAACTGG CCGTGATCGG TGACGCCGAC
GACAGCGACG CCGGCGGCGA CGAGAAGCCC GAGCCTGAGC CGGAACCCGA GCCCGAGGCG
GAAGCCGAAC CGGAACCCGC ACCGGAACCG GAACCCGAGC CGGAGGCCAA GCCCAAGGCG
AAGCCCGCCC AGTCGTCCGG TTCGGCCACG CCGGTGCTGA TGCCCGAGCT GGGTGAGTCG
GTCACCGAGG GGACCGTCAC CCGCTGGCTC AAGAAGGTCG GCGACAGCGT CGACGTCGAT
GAGCCGCTCG TGGAGGTGTC GACGGACAAG GTCGACACCG AGATCCCGTC GCCGGTAGCG
GGCACCCTGC TGTCGATCAC CGCCGAGGAA GACGACACCG TCGAGGTCGG AGGCGAGCTG
GCCAAGATCG GCGACGCCGG GGCCGAAGCC GCCCCCGAGC CCGAACCCGA GCCAGAGCCC
CAGCCCGAAC CGGAACCCAA GACGACCACA CCGTCGGCCA AGCCCGCCGA GGAAGCTGCG
CCCGAGCCCA AGCCGGAACC CACGCCCCAG CCGAAGCCGG AGCCTGCGCC CGCCGCGGCC
GCGGAGTCCT CGGGTGATTC CAGCCCGTAC GTGACACCGC TGGTGCGCAA GCTGGCCGGT
GAGCACAGCG TCGATCTGGC GTCGGTCAAG GGCACCGGCG TCGGCGGACG GATCCGCAAG
CAGGATGTGC TGGCCGCAGC GGAGGCGAGC AAAGCGCCGA AGGAGGCCCC GAAGGCCGCG
CCGGCGGCCG AGGCCCCCGC CAAGGTTCCC ACGCCTGCGC CCGAAGGCGC GTTGGCGCAC
CTGCGCGGAA CCACGCAGAA GGCCAACCGG ATTCGTCAGA TCACCGCGAA GAAGACCCGG
GAATCGCTGC AGACCACTGC GCAGCTGACC CAGGTCCACG AGGTCGACAT GACCAAGATC
GTGGCGCTGC GGGCCAAGGC CAAGGCCAAG TTCGCCGAAC GTGAAGGCGT CAACCTGACC
TACCTGCCGT TCATCGCGCG GGCGGTGATC GACGCGTTGA AGATCCACCC GAACGTCAAC
GCCAGCTACA ACGAGGACTC CAAGGAGATC ACCTACTACG ACGCCGAACA CCTCGGCGTC
GCCGTCGACA CCGAGCAGGG TCTGCTGTCG CCGGTGATCC ACAACGCCGG CGACCTGTCG
CTGGGTGGTC TGGCGCGGGC GATCTCCGAT ATCGCGGCGC GGGCACGGTC GGGCGACCTC
AAGCCCGACG AGCTGTCCGG CGGCACGTTC ACGATCACCA ACATCGGCAG CCAGGGCGCA
CTGTTCGACA CCCCGATTCT GGTACCGCCA CAGGCGGCGA TGCTGGGCAC CGGCGCCATC
GTCAAGAGAC CGAGGGTCAT CGTCGACGAC TACGGCAACG AGTCGATCGG TGTGCGGTCG
GTGAGCTACC TGCCGTTGAC CTACGACCAC CGCCTCATCG ACGGCGCCGA CGCCGGACGC
TTCGTCACGA CGATCAAGCG CCGTCTGGAA GAGGGCGCCT TCGAGGCCGA CCTGGGGCTC
TAG
|
|---|
| Protein sequence | MAISVQMPAL GESVTEGTVT RWLKQEGDTV EEDEPLLEVS TDKVDTEIPS PAAGVLKKIV
AQEDDTVEVG GELAVIGDAD DSDAGGDEKP EPEPEPEPEA EAEPEPAPEP EPEPEAKPKA
KPAQSSGSAT PVLMPELGES VTEGTVTRWL KKVGDSVDVD EPLVEVSTDK VDTEIPSPVA
GTLLSITAEE DDTVEVGGEL AKIGDAGAEA APEPEPEPEP QPEPEPKTTT PSAKPAEEAA
PEPKPEPTPQ PKPEPAPAAA AESSGDSSPY VTPLVRKLAG EHSVDLASVK GTGVGGRIRK
QDVLAAAEAS KAPKEAPKAA PAAEAPAKVP TPAPEGALAH LRGTTQKANR IRQITAKKTR
ESLQTTAQLT QVHEVDMTKI VALRAKAKAK FAEREGVNLT YLPFIARAVI DALKIHPNVN
ASYNEDSKEI TYYDAEHLGV AVDTEQGLLS PVIHNAGDLS LGGLARAISD IAARARSGDL
KPDELSGGTF TITNIGSQGA LFDTPILVPP QAAMLGTGAI VKRPRVIVDD YGNESIGVRS
VSYLPLTYDH RLIDGADAGR FVTTIKRRLE EGAFEADLGL
|
|---|
| |