| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3576 |
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| Symbol | |
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| ID | 4644423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 3803084 |
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| End bp | 3804700 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639807052 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_954376 |
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| Protein GI | 120404547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.129186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.037556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGC AGCGGTTCGT CGAGAGCAGT GACGGTGTCC GGATCGCCGT CTCCGAACAG
GGCAATCCGG ACGGGCCCAC ACTCGTGCTG GTGCACGGAC TTCGCGACAC CCACCGGGTC
TGGGATCCGG TGGTGGCGCT GCTGGCCGAC CGGTTCAGAA TCGTCGCCTA CGACACCAGG
GGAGCGGGCA ACTCCGGTGC GCCCAAACAG ACTTCGGCAT ACACCGTCGA TCGGTTCGCC
GACGACTTCG CGGCCGTCGC CGCCGCCGTC GGCGGTGACA CACCCGTGCA CGTGCTGGCG
CACGGATGGG GGGCCGCCGG GGTGTGGCAG TACCTCAAGC GCGCCGACGC CCCCGAGCGG
GTCGCATCGC TGACCTCGGT GTCGGGCCCC AGCCCCGAGC ACGTCGCCGG ATATGTGCGC
GCCGCGCTGA CCAGCCCGCG CCGGTTCGTC CGCGGCGCCG GCCAGCTCGT GCGCCTCGCC
GCGGCCGCAC CGCGGGCGGC GACGGCCAAG CCGTACCGGG CGAATCTGCG GCCCGCCGCG
CCGGCGGGTG TTCCCGTCGA CGTCCCGGTG CAGCTGATCG TCCCCGACCA CGACCCACAC
GTGGGGCCGC ACGTCTACGA CGGCATGTCC GCGTCGGTCT CGAGGCTGTG GCGGCGCGAC
ATCAAGACCG GCGACCTCTC GCCGGGCTCA CATCCGCAGG TCCTCGCACG GGCGGTCGAC
CAGCTGGTCG ACCACCTCGG CGGCGCCCCG GCCCCGCGAG AGTTGTTGCG CGCGCAGGTC
GGCCGCGCCC GCAAGGTGTT CGGCGACACC CTGGTGTCCG TCACCGGCGC CGCCAGCGGG
ATCGGACGCG AGACCGCGCT GGCGTTCGCC CGGGCCGGTG CCGACGTGGT GATCAGCGAC
GTCGACGAGG CCGGGCTGGA GCAGACCGCG CGGCTGGTCA CCGCGGCCGG GGCGGCGGCG
CACAGTTACA CCGTCGACGT CGCCGACGCC GCAGCCGTCG AGGCGATGGC CGAACTCGTG
TGCGCCGCCC ACGGGGTGCC CGACATCGTG GTCAACAACG CGGGCGTCGG GCACGCCGGG
TTCTTCCTCG ACACCCCGGC CGAGGAGTTC GACCGGGTGC TCGGCATCAA CTTCGGCGGT
GTCGTCAACG GGTGCCGGTC GTGGGGGAGG CGCCTCGTCG ACCGCGGCAC CGGCGGCCAC
ATCGTCAACG TCGCGTCGAT GGCGTCCTAC ACGCCGGTCA ACGTGATGAA CGCCTACTGC
ACGTCCAAGG CGGCCGTCTT CATGTTCTCC GATTGTCTAC GCGCAGAACT GGATTCGGCC
GGAATCGGGG TCACCACGAT CTGTCCGGGT GTGATCGGCA CCAACATCGT CGACACCACC
CGCTTCTCGC TGCCGGAGGC CCGCCGAGAC GACGCGGAAT CGATCCGCCG ACGGGCCCGC
CAGGGCTTCG CGGTGCGACG GGTCGGACCC GACAAGGTGG CCAAGGCCAT CGTCGCGGCG
GTCCAGAAGA ACAAGCCGGT GCGGCCCGTC ACCACGGAGG CGTACCTCGT CTACGGCGTC
GCACACGCGC TGCCGCAGGC CATGCGCAGC GCGGCCCGCG GCGGGAACAT CATGTGA
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| Protein sequence | MSTQRFVESS DGVRIAVSEQ GNPDGPTLVL VHGLRDTHRV WDPVVALLAD RFRIVAYDTR
GAGNSGAPKQ TSAYTVDRFA DDFAAVAAAV GGDTPVHVLA HGWGAAGVWQ YLKRADAPER
VASLTSVSGP SPEHVAGYVR AALTSPRRFV RGAGQLVRLA AAAPRAATAK PYRANLRPAA
PAGVPVDVPV QLIVPDHDPH VGPHVYDGMS ASVSRLWRRD IKTGDLSPGS HPQVLARAVD
QLVDHLGGAP APRELLRAQV GRARKVFGDT LVSVTGAASG IGRETALAFA RAGADVVISD
VDEAGLEQTA RLVTAAGAAA HSYTVDVADA AAVEAMAELV CAAHGVPDIV VNNAGVGHAG
FFLDTPAEEF DRVLGINFGG VVNGCRSWGR RLVDRGTGGH IVNVASMASY TPVNVMNAYC
TSKAAVFMFS DCLRAELDSA GIGVTTICPG VIGTNIVDTT RFSLPEARRD DAESIRRRAR
QGFAVRRVGP DKVAKAIVAA VQKNKPVRPV TTEAYLVYGV AHALPQAMRS AARGGNIM
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