| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3571 |
|---|
| Symbol | cobT |
|---|
| ID | 4644418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3797448 |
|---|
| End bp | 3798491 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639807047 |
|---|
| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_954371 |
|---|
| Protein GI | 120404542 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.592286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0701465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGTACT TTCCTGAGAT TCCCGCACCC GACGCCGACG CCGCCGCTGC GGCGCGGGCC
CGGCAGGCGC TGCTGACCAA ACCCGCGGGC GCGCTGGGCA GGCTCGAGGA CCTGTCGGTC
TGGGTGGCGG CATGCCAGGG CGGCTGTCCG CCCAGGCAGT TCGAGCGGGC GCGGGTGGTG
GTGTTCGCCG GGGATCACGG TGTCGCCGCG TCGGGGGTGT CGGCGTACCC CGCCGACGTG
ACCGCGGCGA TGGTGGCGAA CATCGCCGCC GGCGGCGCCG CGGTGAACGT GCTGGCCGAG
GTGGCGGGCG CGAGCGTGCG GGTCGCAGAC ATTGCCGTCG ACACCGCCGA GCCGCTGTCC
CCCGCAATCG GCGCCGACAA GATCCGCCGA TCCAGCGGCA ACATCGCCGT CGAGGACGCT
CTGACACCGG ACGAGGTGGT GGCAGCCGTC GACGCCGGCC GCCGGATCGC CGACGAGGAG
GTCGACTCCG GCGCCGACCT GCTGATCGCC GGCGACATGG GCATCGGCAA CACCACCCCG
GCGACCACGC TGATCGCCGC GATGACCGAC TCCGAGCCCG TGGCGGTGGT CGGCCGGGGC
ACCGGGATCG ACGACGCCGG CTGGGCGCGC AAGACGGCCG CGATCCGCGA CGCCCTCTAC
CGGACGCGCC GCCTGTCGGC CGATCCCATT GCGCTGCTGA GGATCTGCGG CGGCGCCGAC
CTCGCCGCGA TGACCGGGTT CTGCGCACAG GCGGCGGTAC GCCGCACGCC GTTGGTGTTG
GACGGGATGG TGGTGACGGC CGCCGCGCTG GCCGCCGAGC GGCTCGCACC CGGCGCCAGG
CTCTGGTGGC AGGCCGGCCA CCGCTCCACC GAACCGGCGC ACACGCTGGC GCTGCGTGAC
CTCGGGCTCG AGCCGCTCGT CGAGTTGGGG ATGCGGCTCG GCGAGGGCTC CGGCGCCCTG
GTCGCACTTC CGGTGCTGCG CGCCGCCGTC GCCACCCTGG CGTCGATGGC CACCTTCGAA
GAAGCCGGGA TCGGCGGCGG ATAA
|
|---|
| Protein sequence | MAYFPEIPAP DADAAAAARA RQALLTKPAG ALGRLEDLSV WVAACQGGCP PRQFERARVV
VFAGDHGVAA SGVSAYPADV TAAMVANIAA GGAAVNVLAE VAGASVRVAD IAVDTAEPLS
PAIGADKIRR SSGNIAVEDA LTPDEVVAAV DAGRRIADEE VDSGADLLIA GDMGIGNTTP
ATTLIAAMTD SEPVAVVGRG TGIDDAGWAR KTAAIRDALY RTRRLSADPI ALLRICGGAD
LAAMTGFCAQ AAVRRTPLVL DGMVVTAAAL AAERLAPGAR LWWQAGHRST EPAHTLALRD
LGLEPLVELG MRLGEGSGAL VALPVLRAAV ATLASMATFE EAGIGGG
|
|---|
| |