Gene Mvan_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3564 
Symbol 
ID4644411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3790164 
End bp3791198 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content63% 
IMG OID639807040 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_954364 
Protein GI120404535 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.205108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.039922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCTC GCGGCCTGAA GTTGGTGGCA TTGTCCCTGC TCCTTGGCGG GACGACGGTG 
CTACTCAGCG GATGCAGCTG GTCGGAGGTG CTCGGCCTCG GCTGGCCCAA CGGCATCACC
CCCGAAGCGC ATCTGAACCG TGAACTCTGG ATCGGTTCGG TGATCGCAGC CTTGGTCGTC
GGCGCGATCG TCTACGTCCT GCTGTTCTGG ACCATGGCCT TCCACCGCAA GAAGAAGGGC
GACACGGAGC TGCCGCGTCA GTTCGGCTAC AACATGCCGC TCGAACTGAC GCTGACGGTG
ATCCCGTTCA TCATCATCTC GGTGCTCTTC TACTTCACCG TCGTGGTGCA GGAGAAGATG
GTCCACAAAG AGGACAACCC CGAGGTCGTC ATCGACGTCA CGGCCTACCA GTGGAACTGG
AAGTTCGGCT ACCAGAAGGT CGACTTCGCC GACGGCACGC TGACCTACGA CGGTGAAGAC
AATGCGCGCA AAGAGGCCAT GGTGTCGCGG CCCGAGGGCG TCGACAGCCA CGGCAACGAC
CGCGTCGGTG CGATCTACGG CAAGAACCCC GAGGACCGCT CCTACCTGAA CTTCGACAAG
ATCGAGACGC TGGGCTCGTC CACCGAGATC CCGGTGCTGG TGGTCCCTGC GGGCAAGCGG
ATCGAGTTCG AAATCGCCTC GGCCGACGTC ATCCACGGGT TCTGGGTGCC CGAGTTCCTG
TTCAAGCGGG ACGTGATGCC CAACCCCGAG GAGAACAACT CCGACAACGT CTTCCAGATC
AGCGAGATCA ACCAGACCGG CGCCTTCGTC GGCCGGTGCA CGGAGATGTG CGGCACCTAC
CACGCGATGA TGAACTTCGA GCTGCGCGTC GTGGAGCCCA ACGACTTCAA GGCCTACCTC
GACCAGCGCA GCGCAGGGAA GACGAACGCC GAAGCGCTGC TCGCGATCAA CCAGCCGCCG
CTGGCGATCA CCACCAAGCC GTTCGACACC CGGCGCGGAG AGCTGGCGCC GCAAATGCCC
CAGGCGAGCA GGTAA
 
Protein sequence
MSARGLKLVA LSLLLGGTTV LLSGCSWSEV LGLGWPNGIT PEAHLNRELW IGSVIAALVV 
GAIVYVLLFW TMAFHRKKKG DTELPRQFGY NMPLELTLTV IPFIIISVLF YFTVVVQEKM
VHKEDNPEVV IDVTAYQWNW KFGYQKVDFA DGTLTYDGED NARKEAMVSR PEGVDSHGND
RVGAIYGKNP EDRSYLNFDK IETLGSSTEI PVLVVPAGKR IEFEIASADV IHGFWVPEFL
FKRDVMPNPE ENNSDNVFQI SEINQTGAFV GRCTEMCGTY HAMMNFELRV VEPNDFKAYL
DQRSAGKTNA EALLAINQPP LAITTKPFDT RRGELAPQMP QASR