Gene Mvan_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3553 
Symbol 
ID4647937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3778808 
End bp3780256 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content66% 
IMG OID639807030 
Producttransposase, IS4 family protein 
Protein accessionYP_954354 
Protein GI120404525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.400805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTCTA CGCACTTATC GACACAACTC CGAAAGGCAC TTCCGGTGCA AGTGTCCCAT 
AAGTTCGCCG CGTCGTCGGC GGTCTTCGAT GATGACCATC TCGTGTCGTG CGCAGGACTG
GTCCCGGTGA TGACGTTGGC CGCCCAGACG GGGTTGGCAC AGCTGTTGGC CGCCAAGGTG
CGCATTACCG AGCCGCGGAT CAAGTCCGGA TCGGCCAACC CGGCACCGAA GCTGACGACC
GTGGTCGCGG GGATGTGCGC CGGCGCGGAC TGCATTGATG ACCTCGACCT CGTGCGTAGC
GGTGGGATGA AGACACTGTT CGACGGTGTG TACGCTCCCT CGACCATCGG GACACTGTTG
CGGGAGTTCA CCTTCGGACA CGCCCGCCAA CTCGAATCGG TTCTACGAGA GCATCTGGCC
GGGCTGTGTG AGCGCGTCCA ACTGCTGCCG GGCAGCGATG AGCGGGCGTT TGTCGATATC
GACTCGCTGC TGCGCCCGGT CTACGGCCGC GCCAAGCAAG GCGCCTCTTA CGGGCACACC
AAGATCGCCG GCAAGCAGAT CCTGCGCAAG GGTCTGTCCC CGTTGGTCAC CACCATCAGC
ACCGAGACAG CAGCTCCGGT GATCACCGGA GCCCGGCTAC GGGCGGGCAA GACCAACTCC
GGCAAAGGCG CCGCCCGGAT GATCGCCCAA GCGGTCGCCA CCGCCCGCGC CAGCGGTGTC
ACCGGGCAGA TCCTGGTGCG TGGTGACTCG GCCTACGGCA ACAGCGCCGT GGTGGCCGCC
TGCCGTCGCG CCGGAGCCCG GTTCTCGCTG GTGCTGACCA AGACCGCCGC CGTCGCTGCA
GCCATCGAGT CCATTTCCGA GAGCGCCTGG GTTCCGGTCA AATATCCCGG CGCGGTCCGC
GACCCCGACA CCGGCGCCTG GATCTCCGAT GCCGAAGTCG CCGAAACCAC ATACACCGCT
TTCAGTTCCA CCAAGACCCC GGTCACTGCA CGGTTGATCG TGCGCCGGGT CAAAGACGCC
CGGTTCCTCG ATGCGCTGTT TCCGGTGTGG CGGTACCACC CGTTCTTCAC CGACTCCGAC
GAACCCGTCG ACGCCTCTGA CATCACCCAT CGCCGCCACG CCATCATCGA AACCGTGTTC
GCCGACCTGA TCGACGGACC TTTGGCGCAC ATGCCCTCGG GGCGGTTCGG CGCGAACTCG
GCCTGGATCC TGTGTGCTGC GATCGCCTAT AACCTGCTGC GCGCCGTCGG GGTGCTCGCC
GGAGGTGTCC ATGCGGTCGC GCGAGGAGCC ACACTGCGCC GCAAGTTCGT CAACATCCCG
GCCCGACTGG CTCGGCCGCA ACGCCGAGCA ATCCTGCACC TACCCACCCA CTGGCCGTGG
GCCCAGCAGT GGCTCACATT GTGGCGCAAC ACCATCGGTC ACAGCCCGCC AACTGCTGCG
ACCCACTGA
 
Protein sequence
MFSTHLSTQL RKALPVQVSH KFAASSAVFD DDHLVSCAGL VPVMTLAAQT GLAQLLAAKV 
RITEPRIKSG SANPAPKLTT VVAGMCAGAD CIDDLDLVRS GGMKTLFDGV YAPSTIGTLL
REFTFGHARQ LESVLREHLA GLCERVQLLP GSDERAFVDI DSLLRPVYGR AKQGASYGHT
KIAGKQILRK GLSPLVTTIS TETAAPVITG ARLRAGKTNS GKGAARMIAQ AVATARASGV
TGQILVRGDS AYGNSAVVAA CRRAGARFSL VLTKTAAVAA AIESISESAW VPVKYPGAVR
DPDTGAWISD AEVAETTYTA FSSTKTPVTA RLIVRRVKDA RFLDALFPVW RYHPFFTDSD
EPVDASDITH RRHAIIETVF ADLIDGPLAH MPSGRFGANS AWILCAAIAY NLLRAVGVLA
GGVHAVARGA TLRRKFVNIP ARLARPQRRA ILHLPTHWPW AQQWLTLWRN TIGHSPPTAA
TH