| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3536 |
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| Symbol | |
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| ID | 4647920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 3761456 |
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| End bp | 3762535 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639807013 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_954337 |
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| Protein GI | 120404508 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00519723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.472476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGCAT CGGCACCGTC AGCCGTCGAG CTGGCAGCGG CCGTCACCGA ACAGCTTCGC
GACTACCTGC GTGCTCGCCG CCGAGATGCG GCATACATCG GCGCGGGCTA TGCGGTGTTG
ACCGAGGCCG TCGAAGAGTT CGTGCTGCGC GGCGGGAAAC GACTTCGCCC CGCGTTCGCG
TACTGGGGCT GGCGCGCCGT CGCCGGCACA GAACCCGGAC CGGAGGCGCT GCGGTTGTTC
TCCGCACTCG AGCTTCTGCA CGCGTGCGCA CTCGTTCACG ACGACGTCAT CGACGCCTCG
GCCACTCGGC GCGGCCTGCC GACCGTGCAC CGGATCTTCG CCGAACGGCA CCGCAGCAAC
AACTGGCTCG GCTCGTCGGA ACAGTTCGGC CTGTCGGCGG CGATTCTGCT CGGCGACGTC
GCGCTGGTGT GGGCCGACGA CATCGTCGCG AGCGCCGAGA TCGGCGTCGA AGCACACCGG
CGGGTTCAGC GGGTGTGGGC GGCGATCCGG ACCGAGGTTC TCGGCGGGCA GTACCTGGAC
ATCGTCAACG AGGCCACCGG CGCAGAGACC GTGGCGTCGG CACTGACCGT CAACATCTAC
AAGACCGCGT CCTACACGAT CTCCCGTCCG CTGCAGCTGG GCGCCGCGGC CGCTGCCGAC
TGCCCCGAGG TGCTCTCGGC GTTCCACGAA CTGGGAACCA GCCTCGGGGT GGCGTTCCAG
CTGCGCGACG ACGTCCTCGG AGTGTTCGGC GACCCGGCCG TCACCGGCAA GCCGTCCGGC
GACGACCTGC GCTCCGGCAA GCGCACGGTG CTGCTCGCCG AGGCCGTCGA GCTCGCCGAG
AAGCACGATC AGATCGCGGC CAAACTACTG CGCACGTCCA TCGGCACCGA CCTGACCGAC
GCCCAGGTCA AGGAGGTGTG CCTGGTGATC GAGTCGGTCG GGGCGCTGGC GGCCGTCGAG
AGCCGGATCG ACACCCTGAC CCGGCGCGCG CTGGACATCC TCAACTCCGC GCCCATCGAC
GTACAGGCCA AGGCCGGGCT GGCCGAGCTC GCCAGGATGG CCGCGAACCG GTCCGCCTAG
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| Protein sequence | MDASAPSAVE LAAAVTEQLR DYLRARRRDA AYIGAGYAVL TEAVEEFVLR GGKRLRPAFA
YWGWRAVAGT EPGPEALRLF SALELLHACA LVHDDVIDAS ATRRGLPTVH RIFAERHRSN
NWLGSSEQFG LSAAILLGDV ALVWADDIVA SAEIGVEAHR RVQRVWAAIR TEVLGGQYLD
IVNEATGAET VASALTVNIY KTASYTISRP LQLGAAAAAD CPEVLSAFHE LGTSLGVAFQ
LRDDVLGVFG DPAVTGKPSG DDLRSGKRTV LLAEAVELAE KHDQIAAKLL RTSIGTDLTD
AQVKEVCLVI ESVGALAAVE SRIDTLTRRA LDILNSAPID VQAKAGLAEL ARMAANRSA
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