| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3496 |
|---|
| Symbol | |
|---|
| ID | 4649312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 3715380 |
|---|
| End bp | 3716042 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639806973 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_954297 |
|---|
| Protein GI | 120404468 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.942341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.33628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACTG CATCGCCGGT CCGGCGTCAA CGCCTGTGCT ACCGTCGTGC CACGATGGCC
CGCAAACGCC GAGGTTGGGG CGGTGATCCG CCCGCCACCG ACTCCGAAGC CGCGCAGCGC
ATCGTCGTTG CCGCCGTCGA TCTGATCGCC CGGACGGGGG CGGCCATCAC CATCGCCGAC
GTCGCCGAGT CGCTCGAGGT GACCCGGCAG ACGGTGTACC GCTACTTTTC GACGGCCGAC
GAACTCATGC GCGCCGCCGC GATCGCATCC GTCGACGGAT TCCTCGACCA GCTCGCCGCG
CATGTGCGCG GCATTCACGA TCCGGCCGAC GCGATGACCG AGGGCGTGAT GTTCACCCTC
GACGCCGTCG CGGCGATCCC GCACCTGGCG ATCCTGCTGT CGGCGCCCAG TGAGGCCGCC
AGGCCCAGCG AGGTCACCTC GGACCTCGCG CAGGACTTCG GCATGCGCAT GATCACCCGC
TTCGACGTGG ACTGGCAGCG CTACGGGTAC GACGACGCGG CGCTGCGAGA CCTCGTCGAG
TTCACGCTTC GGACCATGCT GTCGTTCTTC GTCGCGCCCA ACGTGCGCCC CCCTGAAGAG
CTGCGCCGCT TCCTGACGAG GTGGCTGGGC AGCGCGATTC TGGCGCAGAG CGTCAAAGCG
TGA
|
|---|
| Protein sequence | MVTASPVRRQ RLCYRRATMA RKRRGWGGDP PATDSEAAQR IVVAAVDLIA RTGAAITIAD
VAESLEVTRQ TVYRYFSTAD ELMRAAAIAS VDGFLDQLAA HVRGIHDPAD AMTEGVMFTL
DAVAAIPHLA ILLSAPSEAA RPSEVTSDLA QDFGMRMITR FDVDWQRYGY DDAALRDLVE
FTLRTMLSFF VAPNVRPPEE LRRFLTRWLG SAILAQSVKA
|
|---|
| |