Gene Mvan_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3489 
Symbol 
ID4649304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3703700 
End bp3704992 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content68% 
IMG OID639806965 
Producthypothetical protein 
Protein accessionYP_954290 
Protein GI120404461 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.919761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGC TGATCCGGTT CGACACCTCC AACACCGGTG ATCCCGCCAC CACCAAGGGC 
GAAGCGGACT GCGCCCGCTG GGTGGCCGAT CAACTCGCCG AGGTCGGGTA CGTCACCGAG
TACGTCGAAG CGGGGGCACC GGGTCGGGCC AACGTGTTCG CCCGCCTGGA GGGCGCCGAC
CGCTCCCGCG GCGCGCTGAT GCTGCACGGA CATCTGGACG TGGTGCCCGC CGAGGCATCG
GACTGGAGCG TGCACCCGTT CTCCGGCGCC GTCGAGGACG GCTACGTCTG GGGCCGCGGC
GCCGTCGACA TGAAGGACAT GGTCGGGATG ATCATCGCGG TCGCCCGGCA CTTCAAACGC
TCGGGCATCG TTCCGCCGCG CGACCTGGTG TTCGCGTTCG TCTCCGACGA GGAGGCCGGC
GGCAACTTCG GCTGCAAGTG GCTTGTCGAG AACCGCCCCG ACCTGTTCGA CGGGGTGACC
GAGGCCGTCG GCGAGGTCGG CGGGTTCTCG CTGACCGTGC CGCGTCGTGA TGGCGGGGAA
CGCAGGCTGT ACCTGGTCGA AACCGCGGAG AAGGCGATGC TGTGGATGCG CCTGACAGCC
CGGGGCCGTG CCGGGCACGG TTCGATGGTG CACGACGACA ACGCCGTCAC CGCGGTCGCC
GAGGCGGTGG CCAAGCTCGG CAGACACCGG TTCCCGATCG TGCTGACCGA ATCGGTCGAA
CAGTTCCTCA CCGCGGTCGG TGAGGAGACC GGGTACGCGT TCGATCCCGC CTCACCCGAC
ATCGAGGGCA CCGTCGCCAA ACTCGGCGGG ATCGCCCGCA TCGTCGGGGC GACGCTGCGC
GACACCGCGA ACCCGACCAT GCTCAACGCC GGCTACAAGG CGAACGTCAT CCCGGCGACC
GCGGAAGCCG TGATCGACTG CCGGGTGCTG CCCGGCCGGC TGGCCGATTT CGAACGCGAG
GTCGACGAGC TGATCGGCCC GGACGTCAAA AGGGAATGGA TCACCAACCT GCCCTCCTAC
GAGACGCCGT TCGACGGCGA ACTGTTGGAG GCGATGAACA ACGCGATCCT GGCCGCCGAC
CCGGACGCGC GAACGGTGCC CTACATGATG TCCGGCGGCA CGGACGCAAA ACACTTCGCC
CGCTTGGGGA TTCGTTGCTT CGGCTTCGCC CCGCTGCGGC TGCCGCCCGA TCTGGACTTC
GCCGCCCTGT TCCACGGCGT CGACGAACGG GTACCTGTCG ATGCGTTGAC CTTCGGCGCG
CAGGTCCTCG AGAACTTCCT GCTGCACTCG TGA
 
Protein sequence
MSTLIRFDTS NTGDPATTKG EADCARWVAD QLAEVGYVTE YVEAGAPGRA NVFARLEGAD 
RSRGALMLHG HLDVVPAEAS DWSVHPFSGA VEDGYVWGRG AVDMKDMVGM IIAVARHFKR
SGIVPPRDLV FAFVSDEEAG GNFGCKWLVE NRPDLFDGVT EAVGEVGGFS LTVPRRDGGE
RRLYLVETAE KAMLWMRLTA RGRAGHGSMV HDDNAVTAVA EAVAKLGRHR FPIVLTESVE
QFLTAVGEET GYAFDPASPD IEGTVAKLGG IARIVGATLR DTANPTMLNA GYKANVIPAT
AEAVIDCRVL PGRLADFERE VDELIGPDVK REWITNLPSY ETPFDGELLE AMNNAILAAD
PDARTVPYMM SGGTDAKHFA RLGIRCFGFA PLRLPPDLDF AALFHGVDER VPVDALTFGA
QVLENFLLHS