Gene Mvan_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3488 
Symbol 
ID4649303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3703139 
End bp3703675 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID639806964 
ProductPEBP family protein 
Protein accessionYP_954289 
Protein GI120404460 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.274615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.569371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTG ACTACGACCC GTACTCGTTC CTGCCCGCAC TGCCCAACTT CACACTCACC 
TCGCAGTCCT TCGAAGACGG TCAGCCCTGG GGCAAGGATC AGGTCAGCGG CATCATGGGT
GCCGGCGGGT CCGACATCTC GCCGCAGCTG AGCTGGTCCG GCTTCCCGGA GGAGACCCGC
AGCTTCGCCG TCACGGTCTT CGACCCCGAC GCGCCGACGG CTTCCGGGTT CTGGCACTGG
GCGGTCTTCA ACCTGCCCGC CACCGTCACG GATCTGCCCG CCGGCGTCGG CGACGGCAGC
GCGAGCGGAT TTCCCGGTGA CGCAGTCACT TTGGCCAACG ACGCCGGTCT GAAGCGGTTC
ATCGGCGCCG CGCCGCCGGC GGGGCACGGC GTGCACCGCT ACATCGTCGC CGTCCACGCC
GTCGGCGTCG AGAAGCTCGA CGTGCCCGCC GATGCCACCC CGGCCTATCT GGGGTTCAAC
CTGTTCGGGC ACGCGATCGC CCGCGCGCTG ATCACCGGGA CCTACGAACA GCACTGA
 
Protein sequence
MAFDYDPYSF LPALPNFTLT SQSFEDGQPW GKDQVSGIMG AGGSDISPQL SWSGFPEETR 
SFAVTVFDPD APTASGFWHW AVFNLPATVT DLPAGVGDGS ASGFPGDAVT LANDAGLKRF
IGAAPPAGHG VHRYIVAVHA VGVEKLDVPA DATPAYLGFN LFGHAIARAL ITGTYEQH