Gene Mvan_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3438 
Symbol 
ID4646252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3654438 
End bp3655409 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content70% 
IMG OID639806914 
Product5'-3' exonuclease 
Protein accessionYP_954239 
Protein GI120404410 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC CTCCGCTGGT GCTGCTCGAC GGTGCGAGCA TGTGGTTCCG CTCGTACTTC 
GGCGTTCCGT CGTCGATCAC CGCGCCGGAC GGCCGACCGG TCAACGCGCT GCGCGGCTTC
CTCGACGCGG TCGCGACCGT CATCACCCGG GAAAGGCCGC ACCGGCTGGT GGTGTGCCGC
GACGACGACT GGCGCCCGCA GTGGCGGGTG GACCTGATCC CGTCCTACAA GGCCCACCGC
GTGGCCGTGC CGGCCGAGGA AGCGAACCCG CCGACGGACG TCGACGTCGA GGAAGTCCCC
GACGACCTGA CCCCGCAGGT CGACATGATC ATGGAGATGC TGGACGCCTT CGGGATCGCA
ACGGCCGGAG CGCAGCAGTG CGAGGCCGAC GACGTGCTGG GCACGCTGGC GGGCCGGGAG
ACCCGCGACC CGGTGGTGGT GGTCAGCGGG GACCGCGACC TGCTTCAGCT GGTACGCGAC
GAACCGGTAC CGGTGCGGGT GCTCTACCTC GGCCGCGGAC TGGCCAGAGC GACGACGTAC
GGACCCGTCG AGGTGTCCGA GACCTACAAC GTGCCCGTCG ACCGCGCCGG ACCCGCGTAC
GCGGAGTTGG CGCTGCTACG CGGCGACCCT TCCGACGGGC TGCCCGGCGT CCCCGGCATC
GGCGAGAAAA CCGCAGCCAC CCTGCTCGCC CAGCACGGAT CGCTGGAGGC GATTCTCGCG
GCGGCGCAGG ATCCTAAATC GAAGCTGTCC AGGGCGCACC GGACCAAGCT GCTGGCCGCG
TCCGACTACA TCGCGAAGGC CGGCCCGGTG GTGCGGGTGG CCACCGATGC CGACGTCAAC
TTCTCCACCG ACGATGACGC TCTGCCGCTG GCCGCGCGTC ATCCCCGCAA AGTCGCCGAA
CTGGCCGAAC GCTACGGCGT GTCGTCGTCG CTGGGACGGC TGCAGACGGC GCTCGACAAG
CTACCCGGAT AG
 
Protein sequence
MNTPPLVLLD GASMWFRSYF GVPSSITAPD GRPVNALRGF LDAVATVITR ERPHRLVVCR 
DDDWRPQWRV DLIPSYKAHR VAVPAEEANP PTDVDVEEVP DDLTPQVDMI MEMLDAFGIA
TAGAQQCEAD DVLGTLAGRE TRDPVVVVSG DRDLLQLVRD EPVPVRVLYL GRGLARATTY
GPVEVSETYN VPVDRAGPAY AELALLRGDP SDGLPGVPGI GEKTAATLLA QHGSLEAILA
AAQDPKSKLS RAHRTKLLAA SDYIAKAGPV VRVATDADVN FSTDDDALPL AARHPRKVAE
LAERYGVSSS LGRLQTALDK LPG