| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3415 |
|---|
| Symbol | |
|---|
| ID | 4646025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 3629531 |
|---|
| End bp | 3630841 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639806892 |
|---|
| Product | transcriptional regulator, CadC |
|---|
| Protein accession | YP_954217 |
|---|
| Protein GI | 120404388 |
|---|
| COG category | [K] Transcription
[R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG3710] DNA-binding winged-HTH domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.126014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCCGA CGGCTGGCGC TGATCTAGCC GCCACGAGAG GGTGCCGCCA CCGGTACTGT
TGTCGCGTGA CCAGCGCAGA TTCCGCGCTC TCCCCGCACA GGCGCGTGTG GCGCTGGGAT
GATTTCGTCC TCGACGTCGG CTGCTACGAA CTGCGCCGCG GCGACACGAT GATCCGGGTC
GAACCGCAGG TGTTCGACGT GCTGGCCCAA CTGGTCAGCA ACCACGGGCG CTTCGTCAGC
AAGGAAGAGC TCTTCGACAC GGTGTGGGGC GGACGTTTCG TCGGTGAGGC GGCGTTGACC
AGCCGGATCA AGGCGGTCCG GCGGGCGCTC GGAGACGACG GAGAGGCACA GCGATACATC
CGCACGGTGC GTGGCCGCGG CTATCAGTTC GTCGGTCGGC TGCTCGACGA CGGGACCGCG
CCGGCTCCCA CCGCGGCGCC TGAGCCGGCG CCGGAGCCGG TGCCCGAGCC ACCCCGTCAG
CACATCGCGT TCACCCGCGC CGCCGACGGT GTACGGCTGG CGTACGCCGT CTCCGGTGAA
GGTCGACCGC TGGTTCGGGC GGCGAACTGG ATGACGCATC TGGGCTATGA CATCGAAAGC
CCGGTGTGGC GGCACTGGGT ACGGGACATG TCGCTGCGGC ACAAATTCAT CCGCTACGAC
GAGCGCGGCT GCGGGCTGTC CGACTGGGAG GTGGGCGCGT TCACCTTCGA CGACTGGGTG
ACCGACCTGG AGTCGGTGGT GGAGGCCGTC GGGCTGGAGC GCTTCCCACT TCTCGGGGTG
TCGCAGGGCG GTGCGGTGGC CGTCGCCTAC GCGGCCCGCC ATCCCGACCG GGTCACCCGA
CTGGTGCTGT GCGGCGCCTA CGCGCGAGGG CGCGTGGTCC GGGCCATGAA CGACGATGAA
AAGCGGGCTG CTGCACTGGA TCTCGACCTC GCCCGGGTCG GCTGGGGGCG CGACGATCCG
GCGTTCCGGC AGGTGTTCGC TGCGCAGTTC CTGCCGGACG GAACCCGCGC GGACTGGGCT
GCCTTCGACC AACTGCAGCG GCGCACCACC TCACCGGAGA ACGCCGTGCG CTTCCTGGAG
GAGTTCGCGC ACATCGACGT GCGCGACCAG TGCGGTCAGG TCCGGTGCCC GACGTTGATC
CTGCACTCCC GTGACGATCA CCGTGTCCCG ATGCGCTACG GCGAGGAGTT GGCCGCGCTG
ATACCCGACG CGCGCCTGGT CGCACTCTCC AGCAACAACC ACCTGCTGAC CGGTGCCGAG
CCGGCATGGC GGGTGTTCTG CGACGAGGTG GAAACCTTCC TGGCCGTCTG A
|
|---|
| Protein sequence | MPPTAGADLA ATRGCRHRYC CRVTSADSAL SPHRRVWRWD DFVLDVGCYE LRRGDTMIRV
EPQVFDVLAQ LVSNHGRFVS KEELFDTVWG GRFVGEAALT SRIKAVRRAL GDDGEAQRYI
RTVRGRGYQF VGRLLDDGTA PAPTAAPEPA PEPVPEPPRQ HIAFTRAADG VRLAYAVSGE
GRPLVRAANW MTHLGYDIES PVWRHWVRDM SLRHKFIRYD ERGCGLSDWE VGAFTFDDWV
TDLESVVEAV GLERFPLLGV SQGGAVAVAY AARHPDRVTR LVLCGAYARG RVVRAMNDDE
KRAAALDLDL ARVGWGRDDP AFRQVFAAQF LPDGTRADWA AFDQLQRRTT SPENAVRFLE
EFAHIDVRDQ CGQVRCPTLI LHSRDDHRVP MRYGEELAAL IPDARLVALS SNNHLLTGAE
PAWRVFCDEV ETFLAV
|
|---|
| |