Gene Mvan_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3396 
Symbol 
ID4645006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3611649 
End bp3612449 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID639806874 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_954199 
Protein GI120404370 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.346548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.629357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA CTGCCCGCGC CGAGGCGGCG TTCACCGACA TCATGACCTT TCCACCACCC 
GAGGTGACCA GCCCCGCCGC GGCACACATA CTCGCCTTCG TCTTCGCCGA CGTGTGGCAA
CGCCCCGGGC TGAGCCGCCG GGACCGGCAC TTCGTCACGC TCCCCTGTGT CGCCGCCGCC
GATGCAGAAG GACCGTTGCG CGACCACGTC TACGCCGCGC TCAACAGCGG GGAGGTGACG
ATCACCGAGA TGCGGGAAGC AGTACTGCAT TTCGCGGTCT ACGGCGGATG GCCCAAGGCG
TCCCGGTTCA ACATGATCGT CGACGAACAG TGGCACCGCA TCCACGGCGA GCGCGGTGTG
GAGGTACCTC CGCCGCCTCC GCTGCTTCCG CTGACCACAC CGAGCGATCC CGAAGCCCGG
CTGGCCGCCG GGGAGCAGTC GTTCAAGGAC GTCAACTGCC TGCCCTTCGC GCCGGCCCGG
GACGACCCCT TCCACGGCGC GGGCATCCTG AACTTCGTCT TCGGTGAGAT GTGGTTGCGT
CCCGCGCTTG GTATGCGGGA ACGACGGCTG ATCACCGTGG CCTGCGTGGC CTTCCAGGAC
GCGCCATACC CGATCATCAG CCACGTCTAC GCCGCGCTGA AGAGCCGTGA TCTGTCGTTC
ACCGAAATGG ACGAGCTGAC ACTGCATTTC GCTGCCTACT ACGGCTGGCC GAAAGCTGCC
CACCTGAGTC AGGTGGCGGC AGAGCAGAAG TCGCGCGTGA CCGAGGAGTG GGCCGCCGAG
GGCCACGGTC AGTCGGCCTG A
 
Protein sequence
MTSTARAEAA FTDIMTFPPP EVTSPAAAHI LAFVFADVWQ RPGLSRRDRH FVTLPCVAAA 
DAEGPLRDHV YAALNSGEVT ITEMREAVLH FAVYGGWPKA SRFNMIVDEQ WHRIHGERGV
EVPPPPPLLP LTTPSDPEAR LAAGEQSFKD VNCLPFAPAR DDPFHGAGIL NFVFGEMWLR
PALGMRERRL ITVACVAFQD APYPIISHVY AALKSRDLSF TEMDELTLHF AAYYGWPKAA
HLSQVAAEQK SRVTEEWAAE GHGQSA