| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3390 |
|---|
| Symbol | |
|---|
| ID | 4645000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3607132 |
|---|
| End bp | 3607989 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639806868 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_954193 |
|---|
| Protein GI | 120404364 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.861555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.576892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC AGGCCGGGGC CGCGATCGCC ACCGCCGCCC AACACGATCC CAAGCCCAAA
AAGGTACGCG GCCGCACCAA TTGGGGCGAC CTGGCGCTGA AGATGGTCGC CGGGCTGGTG
CTGCTCTACC TGTTCCTGCC GATCTTCGTC ATCGTGCTGT TCTCCTTCAA CAAACCCGCG
GGCAAGTTCA ACTACACCTG GCAGGGCTTC ACGCTGGAGA ACTGGCTCGA CCCGTTCAAG
TACCCGCCGC TGACCGAGGC GCTAAAGCTC AGCCTCAACG TGGCCGCGGT GTCGACGGCG
GTCGCGCTGG TGCTGGGCAC CCTGGTGGCG ATCGCGCTGG TGCGTCAGCG CTGGCGTGGG
CAGCGCGCGG TCGACACCTT CCTGGTGATT CCGCTGACGG CGCCCGAGGT GGTGATGGGT
GCGGCGCTGC TGACGCTCTT CCTTGACCTC AGCTGGCCCG CCGGTTATAC GACGATCCTG
TTGTCGCACA TCGCTTTCGA GGTCAGCTTC ATCGCGATGA CGGTCCGCGC CCGGGTGCGC
GGGTTCGACT GGACGCTGGA GGACGCGTCG CTGGATCTGG GCGCCGGCCC GGCCCGCACG
TTCTTCAAGG TGACGCTGCC GCTGATCGTG CCCGGCATCG TGGCGGCGGC GATGCTGTCG
TTCGCGCTGT CGCTGGACGA CTTCATCATC ACCTACTTCG TCAGCGGGGC GGAGGTCACG
TATCCGCTCT ACGTCAACGC GGCGGTGAAG GCCGCGGTGC CGCCACAGAT CAACGTGCTG
GCGACGGCGA TCCTCGTGGT GAGCCTGGTC CTGTTGGCGG TGAGTACCCT CTACCGCCGC
AAGAGGTTCG CGGGCTGA
|
|---|
| Protein sequence | MTTQAGAAIA TAAQHDPKPK KVRGRTNWGD LALKMVAGLV LLYLFLPIFV IVLFSFNKPA
GKFNYTWQGF TLENWLDPFK YPPLTEALKL SLNVAAVSTA VALVLGTLVA IALVRQRWRG
QRAVDTFLVI PLTAPEVVMG AALLTLFLDL SWPAGYTTIL LSHIAFEVSF IAMTVRARVR
GFDWTLEDAS LDLGAGPART FFKVTLPLIV PGIVAAAMLS FALSLDDFII TYFVSGAEVT
YPLYVNAAVK AAVPPQINVL ATAILVVSLV LLAVSTLYRR KRFAG
|
|---|
| |