Gene Mvan_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3382 
Symbol 
ID4644992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3598343 
End bp3598864 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content73% 
IMG OID639806860 
ProductTspO and MBR like proteins 
Protein accessionYP_954185 
Protein GI120404356 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.344591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTGG CGCCGGTGCC GCGCGCAGAG AGGACCAGAA TGCGCCCGTC GACCCTCGCG 
AAAACCGCAG GCGCCGCGTT CGCCACCGCC GCCGCCGGTG GGCTGGCCAC CCGATCGGCG
GTCGACTCGA AGTGGTACCG GCGGCTGCGC AAGCCCGGCT TCCAGCCGCC CCGGGCCGCG
TTCCCCATCG CCTGGAACGT CCTGTACACC GACATCGCCG CGGTGTCGGC GTCGACGATC
GACACGCTCA ACGACCGCGG CGAGACGGAC CGGGCGCGGG CCTACACCCG GGCGCTGGCG
CTGAACCTCG CGCTCAACGC CGGCTGGAGC TGGGTTTTCT TCAACCGGCG CATGCTTGGT
CCGGCGGCCG TCGTCGCCGC CGGGCTGACC GTAAGCAGTG CCGACCTCGC TCGCCGCGCC
GGGCAGGTCA ACGCCCCGGC GGGAGCCGCC TTGGCGGCCT ACCCCCTGTG GTGTGTGTTC
GCGACGGCGC TGTCCACCCG GATCTGGCAG CTGAATCGCT GA
 
Protein sequence
MRVAPVPRAE RTRMRPSTLA KTAGAAFATA AAGGLATRSA VDSKWYRRLR KPGFQPPRAA 
FPIAWNVLYT DIAAVSASTI DTLNDRGETD RARAYTRALA LNLALNAGWS WVFFNRRMLG
PAAVVAAGLT VSSADLARRA GQVNAPAGAA LAAYPLWCVF ATALSTRIWQ LNR