| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3375 |
|---|
| Symbol | |
|---|
| ID | 4647658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 3591700 |
|---|
| End bp | 3592689 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639806853 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_954178 |
|---|
| Protein GI | 120404349 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.210479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTAC TGGTCACCGG CGGCACCGGT TTCGTCGGTG CATGGACCGC GAAGGCAGCC
CAGCAGGCCG GACACCAGGT CCGGTTCCTG GTCAGGAACC CCGACCGGCT CACCACCAGC
GCCGAGAAGA TCGGCGTCGA CATCAGCGAC CACGCCGTCG GCGACATCGC CGACGCCGCG
GCCACCGCGG CGGCACTCGA TGGCTGCGAC GCCGTCATTC ATTGTGCGGC AATGGTTTCC
ACCGACCCCA GCCGCGCCGA CGAGATGTTG CACACCAATC TCGAAGGCGC CCGCAACGTC
CTCGGTGAGG CCGCGCGGGT CGGCATCGAC CCGATAGTGC ACGTCTCGAG CTTCACCGCG
CTGTTCCGCC CCGACCTCGA CGTGCTGCAC GCCGACCTGC CCGTGGTGGG CGGCAGCGAC
GGCTACGGAC GGTCCAAGGC CGTGGTCGAG GCTTACGCGC GCGGTCTGCA GGACGGGGGC
GCGCCGGTCA ACATCACCTA TCCCGGAATG GTGCTCGGAC CTCCCGCCGG TGACCAGTTC
GGGGAGGCCG CCGAAGGCGT CGAGGCGTCC GTGAAGATGC GCGGAGTGCC CGGGCGCAGC
GCGGCCTGGA TCGTCATCGA CGTCCGTGAT CTCGCGGACC TGCATGTGGC GCTGCTCGAA
CCCGGACGGG GACCGCGCCG CTATATGGCT GGCGGACAAC GTGTCCCGGT CGACATGCTG
GCTTCGATGA TCGGCACCGC GGCCGGCCGG TCGCTGGCCG TCTACCCGGT GCCCGACGTC
GCGCTGCGCA GCGCGGGCAG GCTGCTCGAC GTGGTGGGCC CCTTCCTGCC GTTCGAGACG
CCGATCAACT CTGCGGCGAT GCAGTACTAC ACCCAGATGC CCGAATCCGA CGACACCCCA
AGCCGGCGCG ACCTCGGCAT CACCCAGCGC GACCCCGCCG AAACCATCGC CGACACGGTC
GAGGGCCTGC GGCGGGTCGG CCGACTCTAA
|
|---|
| Protein sequence | MKVLVTGGTG FVGAWTAKAA QQAGHQVRFL VRNPDRLTTS AEKIGVDISD HAVGDIADAA
ATAAALDGCD AVIHCAAMVS TDPSRADEML HTNLEGARNV LGEAARVGID PIVHVSSFTA
LFRPDLDVLH ADLPVVGGSD GYGRSKAVVE AYARGLQDGG APVNITYPGM VLGPPAGDQF
GEAAEGVEAS VKMRGVPGRS AAWIVIDVRD LADLHVALLE PGRGPRRYMA GGQRVPVDML
ASMIGTAAGR SLAVYPVPDV ALRSAGRLLD VVGPFLPFET PINSAAMQYY TQMPESDDTP
SRRDLGITQR DPAETIADTV EGLRRVGRL
|
|---|
| |