| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3356 |
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| Symbol | rpsA |
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| ID | 4644403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 3572216 |
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| End bp | 3573661 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639806834 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_954159 |
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| Protein GI | 120404330 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0698685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.453235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGTC CCTCCGTCAC CTCGCCGCAA GTAGCCGTCA ACGACATCGG CTCGGCTGAG
GACTTTCTCG CCGCCATCGA CAAAACCATC AAATACTTCA ACGATGGCGA CATCGTCGAG
GGAACCATCG TCAAGGTTGA CCGTGACGAA GTCCTGCTCG ACATCGGTTA CAAGACTGAA
GGCGTCATCC CTTCCCGCGA GCTGTCCATC AAGCACGACG TCGACCCCAA TGAGGTTGTG
TCCGTCGGCG ACGAGGTCGA AGCTCTGGTC CTCACCAAGG AGGACAAGGA AGGCCGCCTG
ATCCTGTCCA AGAAGCGCGC TCAGTACGAG CGTGCCTGGG GCACCATCGA AGAGCTCAAG
GAGAAGGACG AGGCCGTCAA GGGCACCGTC ATCGAGGTCG TCAAGGGCGG CCTGATCCTC
GACATCGGTC TGCGCGGCTT CCTGCCCGCC TCGCTGGTCG AGATGCGTCG TGTCCGCGAT
CTGCAGCCGT ACATCGGCAA GGAGATCGAG GCCAAGATCA TCGAGCTCGA CAAGAACCGC
AACAACGTGG TGCTCTCGCG TCGCGCCTGG CTGGAGCAGA CCCAGTCCGA GGTGCGCAGC
GAGTTCCTCA ACCAGCTCAC CAAGGGCGCC ATCCGCAAGG GTGTGGTGTC GTCGATCGTC
AACTTCGGCG CGTTCGTCGA TCTCGGCGGC GTCGACGGCC TAGTGCACGT CTCCGAGCTG
TCCTGGAAGC ACATCGACCA CCCGTCCGAG GTCGTCCAGG TGGGCGACGA GGTCACCGTC
GAGGTGCTCG ACGTCGACAT GGACCGCGAG CGGGTTTCGC TGTCGCTCAA GGCAACTCAG
GAAGATCCGT GGCGCCACTT CGCGCGTACC CACGCGATCG GTCAGATCGT GCCGGGCAAG
GTCACCAAGC TGGTGCCGTT CGGTGCGTTC GTCCGCGTCG AGGAGGGCAT CGAGGGCCTG
GTGCACATCT CGGAGCTCTC CGAGCGCCAC GTCGAGGTTC CGGACCAGGT GGTCCAGGTC
GGCGACGACG CGATGGTCAA GGTCATCGAC ATCGACCTGG AGCGTCGCCG GATCTCGCTG
AGCCTCAAGC AGGCCAACGA GGACTACTCC GAGGAGTTCG AGGCCTGGAA GTACGGCATG
GCCGACAGCT ACGACGACCA GGGCAACTAC ATCTTCCCCG AGGGCTTCGA CGCCGACACC
AACGAGTGGC TCGAAGGCTT CGAGAAGCAG CGTGACGAGT GGGAGGCGCG GTACGCCGAG
GCCGAGCGCC GCCACAAGAT GCACACTGCG CAGATGGAGA AGTTCGCTGC TGCCGAGGCC
GAGGAGGCCG CCCGCCCGAC GTCTTCGTCG TCGAACGGTG CGCGCTCCGA GGAGTCGGCA
GGCGGGTCGC TCGCCAGCGA CGCGCAGCTC GCCGCTCTGC GCGAGAAGCT CGCGGGCAAC
GCCTGA
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| Protein sequence | MPSPSVTSPQ VAVNDIGSAE DFLAAIDKTI KYFNDGDIVE GTIVKVDRDE VLLDIGYKTE
GVIPSRELSI KHDVDPNEVV SVGDEVEALV LTKEDKEGRL ILSKKRAQYE RAWGTIEELK
EKDEAVKGTV IEVVKGGLIL DIGLRGFLPA SLVEMRRVRD LQPYIGKEIE AKIIELDKNR
NNVVLSRRAW LEQTQSEVRS EFLNQLTKGA IRKGVVSSIV NFGAFVDLGG VDGLVHVSEL
SWKHIDHPSE VVQVGDEVTV EVLDVDMDRE RVSLSLKATQ EDPWRHFART HAIGQIVPGK
VTKLVPFGAF VRVEEGIEGL VHISELSERH VEVPDQVVQV GDDAMVKVID IDLERRRISL
SLKQANEDYS EEFEAWKYGM ADSYDDQGNY IFPEGFDADT NEWLEGFEKQ RDEWEARYAE
AERRHKMHTA QMEKFAAAEA EEAARPTSSS SNGARSEESA GGSLASDAQL AALREKLAGN
A
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