| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3355 |
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| Symbol | |
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| ID | 4644402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 3570937 |
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| End bp | 3572157 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639806833 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_954158 |
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| Protein GI | 120404329 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.717574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.451695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCCC TGGACGGCGT CTTCCGGCGC GAATGGGGTC GCACGGTGGC CGCGATCGCA
CGTTGGTGCG GCGATCTCAC CGTCGCCGAG GACGCCGTCC AGGAGGCCTG CGCCGACGCG
CTGCGGTCCT GGCCGCGCGA CGGGGTGCCC GAGGTGCCCG GCGCCTGGCT GGTGACGACG
GCCCGCAACC GGGCACGCGA CCGTCTGCGG CGCGAGTCGG CTCGCCCGGG GAAGGAGTTG
GCAGCGGTGC TCGACGACAT CATTGCCCGC ACCGACGGAC CCGAAGTGCC CCACCGGGTG
CGCGACGACG AGCTGCGGAT GATGTTCACC TGCGCGCACC CTGCGCTGGA GCGGCCGTCG
CAGCTTGCGC TGACGCTGCG ACTGGTGTCC GGGCTCACGG TCGCCGAGAT CGCGCGGGCC
CTGTTGCAGA GCGAAGCCGC GGTCGGGCAG CGAATCACCC GCGCCAAAGC CAAGATCCGG
CACGCGAACA TTCCGCTGCG GGTTCCGCCG GGCGAGTTGC TGGCCCAGCG CACACCACAC
GTGCTGGCCT GCATCTACTC GGTGTTCACC GAGGGCTACT GGTCCACCGC CGGCCCCTCG
GCGATCCGCG ATGAGCTGTG CGACGAGGCG GTGCGCCTCA CCGGTGAACT GTGCGTGGCG
ATGCCCGAGG AACCCGAGGG GCATGCGCTG GCGGCCCTTG TGCTGCTGCA TGATTCGCGT
CGCGCCACCC GGACCGACGG ACGTGGGACG CTGGTGCCGT TGGAGGAGCA GGACCGGCGG
CGCTGGGATC GCGGCAAGAT CGCCCGTGGC CTGGAGCAGT TACGCCGAGC CGGCGGGTCG
CCCGGACCGT ACCTGCCGCA GGCGGTGATC GCCGCCGTAC ACGCGACTGC TCCCTGCTGG
GAGCAGACCG ACTGGGTCAC CATCTGCGCG GCCTACGACC GGCTGCTCGG TATCGCCGAT
TCGCCGGTGG TGCGGGCCAA CCGCGCCATG GCCGTCGGAT TCCGCGACGG CCCGGATGCC
GGGCTGGCAG CGTTGGAGAC GGTGGCCGAC GATCCGCGGC TGGCGCGCTC TCCCCTGGTG
GCCACGGTGC GCGCCGATCT GCTCCGGCGC GCGGGCCGTG ACGACGAGGC CGTGGTGTCG
TATCGACATG CCCTGGCCGC GAACGGGTCA ATACCCGGGC GGGAGTTCCT GGCGCGCCGG
ATCGCCGAAT GCGGCGGCTG A
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| Protein sequence | MQSLDGVFRR EWGRTVAAIA RWCGDLTVAE DAVQEACADA LRSWPRDGVP EVPGAWLVTT
ARNRARDRLR RESARPGKEL AAVLDDIIAR TDGPEVPHRV RDDELRMMFT CAHPALERPS
QLALTLRLVS GLTVAEIARA LLQSEAAVGQ RITRAKAKIR HANIPLRVPP GELLAQRTPH
VLACIYSVFT EGYWSTAGPS AIRDELCDEA VRLTGELCVA MPEEPEGHAL AALVLLHDSR
RATRTDGRGT LVPLEEQDRR RWDRGKIARG LEQLRRAGGS PGPYLPQAVI AAVHATAPCW
EQTDWVTICA AYDRLLGIAD SPVVRANRAM AVGFRDGPDA GLAALETVAD DPRLARSPLV
ATVRADLLRR AGRDDEAVVS YRHALAANGS IPGREFLARR IAECGG
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