Gene Mvan_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3342 
Symbol 
ID4644388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3558961 
End bp3559404 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID639806819 
ProductUspA domain-containing protein 
Protein accessionYP_954145 
Protein GI120404316 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0537895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.663702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT ATCAAACGGT GGTGGTTGGT ACGGACGGAT CTGATTCGTC GTTGCGTGCC 
GTGGACCGCG CCGGTCAGAT CGCCGCAGGG GCGCACGCGA AGCTCATTGT CGCGACCGCC
TACTTCCCTC AGACCGAGGA CGCGCGCGCC GCGGACGTCC TCAAGGACGA GGGCTACAAG
ATGTCCGGCA ATGCCCCGAT CTACGCGATC CTGCGTGAGG CACGGGACCG TGCGAAAGCT
GCCGGAGCCG AGAACATCGA GGAGAAGGCG GTCGTGGGAG CGCCCGTCGA CGCTCTCGTC
GACCTCGTCG AGGAGGTCGG CGCGGACCTG CTCGTCGTCG GCAACGTGGG CCTGAGCACT
ATCGCGGGTC GACTCCTGGG ATCGGTCCCG GCCAACGTGG CGCGGCGGTC GAAGATCGAC
GTGCTGATCG TGCACACCTC CTGA
 
Protein sequence
MSAYQTVVVG TDGSDSSLRA VDRAGQIAAG AHAKLIVATA YFPQTEDARA ADVLKDEGYK 
MSGNAPIYAI LREARDRAKA AGAENIEEKA VVGAPVDALV DLVEEVGADL LVVGNVGLST
IAGRLLGSVP ANVARRSKID VLIVHTS