Gene Mvan_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3339 
SymboluvrA 
ID4644385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3554264 
End bp3557167 
Gene Length2904 bp 
Protein Length967 aa 
Translation table11 
GC content67% 
IMG OID639806816 
Productexcinuclease ABC subunit A 
Protein accessionYP_954142 
Protein GI120404313 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.818177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACC GCCTAGTTGT CAAGGGTGCC CGGGAGCACA ATCTGCGCGG AGTCGACCTC 
GACCTGCCGC GTGACGCGAT GATCGTGTTC ACCGGGCTGT CGGGCTCCGG CAAATCGTCG
CTGGCGTTCG ACACCATCTT CGCCGAGGGG CAGCGCCGCT ACGTCGAGTC GCTGTCGGCG
TATGCCCGGC AGTTCCTCGG CCAGATGGAC AAGCCGGACG TGGACTTCAT CGAGGGACTG
TCGCCCGCGG TGTCGATCGA CCAGAAGTCC ACCAACCGCA ACCCGCGCTC GACCGTCGGC
ACCATCACCG AGGTCTACGA CTACCTGCGC CTCCTGTACG CGCGGGCCGG GACGCCGCAC
TGCCCGGTGT GCGGTGAGCG GATCGCCCGC CAGACCCCGC AGCAGATCGT CGACCAGGTC
CTCGCGATGG ACGAGGGGCT CCGCTTCCAG GTGCTCGCGC CGGTGGTGCG CACCCGCAAG
GGGGAGTTCG TCGACCTGTT CGACAAGCTC AACAGCCAGG GCTACAGCAG GGTGCGGGTC
GACGGCGTGG TGCATCCGCT GACCGATCCG CCCAAGCTGA AGAAGCAGGA GAAGCACGAC
ATCGAGGTCG TGGTGGACCG GCTGACGGTC AAGGCGACCG CCAAGCAGCG GCTCACCGAC
TCGGTGGAGA CGGCGCTGAA CCTCGCCGAC GGCATCGTCG TGCTGGAGTT CGTCGACCGG
GAAGACGACC ATCCGCACCG CGAGCAGCGC TTCTCCGAGA AGCTGGCCTG CCCCAACGGG
CACCCGCTGG CCGTCGACGA CCTGGAACCG CGCTCGTTCT CGTTCAACTC GCCCTACGGC
GCCTGCCCGG AATGCACCGG GCTGGGCATC CGCAAGGAGG TCGACCCCGA CCTGGTGGTG
CCCGATCCCG ACCTGACGCT CGCCGAAGGC GCCATCGCCC CGTGGTCGAT GGGCCACACC
GCGGAGTACT TCACCCGGAT GCTGTCCGGC CTGGGCGATC AACTCGGATT CGACGTCAAC
ACCCCGTGGA AGAAGCTGCC GGCCAAGGCG CGCAGGGCGA TTCTGGAGGG CTGCGACGAG
CAGGTGCACG TGCGGTACAA GAACCGCTAC GGCCGCACCC GGTCGTACTA CGCCGATTTC
GAGGGCGTGA TGGCGTTCCT GCAGCGCCGC ATGGAGCAGA CCGACTCCGA GCAGATGAAG
GAGCGGCTCG AGGGCTTCAT GCGTGACGTG CCGTGCCCCG AGTGCGACGG CACCCGCCTC
AAACCGGAGA TCCTGGCGGT GACGATGACC GCAGGAAACT TCGGCGCGAA GTCGATCGCC
GAGGTGGCCG AACTGTCGAT CGCCGACTGT GCGGAGTTTC TCAACGCGCT GACCCTTGGC
ACCAGGGAGG CCGCCATCGC CGGGCAGGTC CTCAAGGAGA TCCAGTCACG GCTGGGCTTC
CTGCTCGATG TCGGCCTGGA CTACCTGTCG CTGTCCCGGG CGGCGGGCAC CTTGTCCGGA
GGTGAGGCGC AGCGTATCCG GCTGGCCACC CAGATCGGGT CCGGCCTGGT CGGGGTGCTC
TACGTGCTCG ACGAACCCTC GATCGGTCTG CACCAGCGTG ACAACCGCAG GTTGATCGAC
ACGCTCGTGC GGCTGCGCGA TCTGGGCAAC ACCCTCATCG TCGTCGAACA CGACCTCGAC
ACCATCGCTC ATGCCGACTG GGTCGTCGAC ATCGGGCCCG CCGCCGGCGA GCACGGCGGC
CAGATCGTGC ACAGCGGCAC CTACGAGGAT CTGCTCAGGA ACCCGAATTC CATTACCGGG
GCCTATCTTT CGGGCAAGGA GGAGATCGAG GTCCCCGACA TGCGCCGGGT GGTGGACAGG
AAACGTCAGC TCACCGTCGT CGGTGCGCGC GAACACAACC TGCGCGAGAT CGACGTGGCG
TTCCCGCTCG GGGTGCTGAC CTCGGTCACC GGTGTCTCGG GTTCGGGCAA GTCGACTCTG
GTGAACGACA TCCTGGCGTC GGTGCTGGCC AACAAGCTCA ACGGAGCGCG GCTGGTGCCC
GGTCGGCACA CCCGGGTCAA CGGACTCGAT CACCTCGACA AGCTTGTCCG TGTCGACCAG
TCGCCGATCG GACGGACACC ACGGTCCAAT CCGGCGACCT ACACCGGTGT CTTCGACAAG
ATCCGCACCC TGTTCGCCGC AACGACCGAG GCCAAGGTCC GCGGATACCA GCCGGGCCGG
TTCTCGTTCA ACGTCAAGGG GGGCCGGTGC GAGGCCTGTT CGGGCGACGG CACCATCAAG
ATCGAGATGA ACTTCCTGCC CGACGTGTAT GTGCCGTGCG AGGTGTGCCA GGGGGCCCGC
TACAACCGGG AGACCCTGGA GGTGCACTAC AAGGGCAAGA CGATCGCCGA GGTTCTCGAC
ATGTCGATCG AGGAGGCCGC CGAGTTCTTC GCGCCGATCA GCTCGATCCA CCGGTATCTC
AAGACGCTCG TGGACGTCGG TCTGGGATAT GTGCGGTTGG GTCAGCCCGC ACCGACGTTG
TCCGGCGGCG AGGCCCAGCG CGTGAAGCTG GCCTCGGAAC TGCAGAAGCG TTCGACCGGC
CGGACCATCT ACATCCTCGA CGAGCCCACC ACCGGGCTGC ATTTCGAGGA CATCCGCAAG
CTGCTCACCG TGATCAACGG CCTCGTCGAC AAGGGCAATA CGGTCATCGT CATCGAGCAC
AACCTCGACG TGATCAAGAC CTCGGACTGG GTCGTCGACA TGGGTCCCGA GGGAGGATCG
GGCGGCGGCA CCGTGGTCGC GACCGGCACC CCCGAGGACG TGGCGGCCAA CCCGGACAGC
TACACCGGGC ACTTCCTCGC CGAGACCTTG GGCGTGGCCC GGCCGAAACC GAAGTCGCGC
AGGCGAAGCA AGGTCAGCGC CTAG
 
Protein sequence
MADRLVVKGA REHNLRGVDL DLPRDAMIVF TGLSGSGKSS LAFDTIFAEG QRRYVESLSA 
YARQFLGQMD KPDVDFIEGL SPAVSIDQKS TNRNPRSTVG TITEVYDYLR LLYARAGTPH
CPVCGERIAR QTPQQIVDQV LAMDEGLRFQ VLAPVVRTRK GEFVDLFDKL NSQGYSRVRV
DGVVHPLTDP PKLKKQEKHD IEVVVDRLTV KATAKQRLTD SVETALNLAD GIVVLEFVDR
EDDHPHREQR FSEKLACPNG HPLAVDDLEP RSFSFNSPYG ACPECTGLGI RKEVDPDLVV
PDPDLTLAEG AIAPWSMGHT AEYFTRMLSG LGDQLGFDVN TPWKKLPAKA RRAILEGCDE
QVHVRYKNRY GRTRSYYADF EGVMAFLQRR MEQTDSEQMK ERLEGFMRDV PCPECDGTRL
KPEILAVTMT AGNFGAKSIA EVAELSIADC AEFLNALTLG TREAAIAGQV LKEIQSRLGF
LLDVGLDYLS LSRAAGTLSG GEAQRIRLAT QIGSGLVGVL YVLDEPSIGL HQRDNRRLID
TLVRLRDLGN TLIVVEHDLD TIAHADWVVD IGPAAGEHGG QIVHSGTYED LLRNPNSITG
AYLSGKEEIE VPDMRRVVDR KRQLTVVGAR EHNLREIDVA FPLGVLTSVT GVSGSGKSTL
VNDILASVLA NKLNGARLVP GRHTRVNGLD HLDKLVRVDQ SPIGRTPRSN PATYTGVFDK
IRTLFAATTE AKVRGYQPGR FSFNVKGGRC EACSGDGTIK IEMNFLPDVY VPCEVCQGAR
YNRETLEVHY KGKTIAEVLD MSIEEAAEFF APISSIHRYL KTLVDVGLGY VRLGQPAPTL
SGGEAQRVKL ASELQKRSTG RTIYILDEPT TGLHFEDIRK LLTVINGLVD KGNTVIVIEH
NLDVIKTSDW VVDMGPEGGS GGGTVVATGT PEDVAANPDS YTGHFLAETL GVARPKPKSR
RRSKVSA