Gene Mvan_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3328 
Symbol 
ID4644525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3540526 
End bp3541257 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID639806805 
Producttranslation initiation factor IF-3 
Protein accessionYP_954131 
Protein GI120404302 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.825238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.390058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCC TGGTCGGCTT TGGGCCCTGC TTTGAGCAGG GCTTATCTGT TCTATGCGAG 
CAGTGTGCCG GCGGCGAATG GGGTTCCGCT AGGACAGCAG GAACTATCCC GGGAGGCCCC
ATCAGCACTG AGACCCGCGT CAACGAGCGC ATCCGCGTAC CTGAAGTCCG CCTGATCGGA
CCGGGCGGTG AGCAGGTAGG CATCGTGCGC ATCGAAGATG CACTCCGCGT CGCCGCGGAT
GCCGATCTCG ACCTTGTCGA AGTTGCCCCC GACGCCAAGC CGCCGGTGTG CAAGATCATG
GACTACGGCA AGTTCAAGTA CGAGACGGCC CAGAAGGCAC GCGAGTCTCG CAAGAACCAG
CAGCAGACCG TCGTCAAGGA ACAGAAGCTG CGTCCCAAGA TCGACCCGCA CGATTACGAG
ACCAAGAAGG GTCACGTCAT CCGCTTCCTG GAGGCCGGGT CGAAGGTCAA GGTGACGATC
ATGTTCCGCG GACGTGAGCA GTCGCGGCCC GAACTGGGCT TCCGGCTCCT GCAACGCCTG
GGCGCCGACG TCGCCGAATA CGGCTTCATC GAGACGTCCG CCAAGCAGGA CGGCCGCAAC
ATGACGATGG TGCTGGCGCC GCACCGCGGC GCGAAGACTC GTGCCAAGGC GGCGCACGAT
GCAGACACCC CGGCCGGGCA GCGCGGTGAC GCGCAGGCAG CCGACGCACC GACCGACACA
CCAAAGAACT GA
 
Protein sequence
MSVLVGFGPC FEQGLSVLCE QCAGGEWGSA RTAGTIPGGP ISTETRVNER IRVPEVRLIG 
PGGEQVGIVR IEDALRVAAD ADLDLVEVAP DAKPPVCKIM DYGKFKYETA QKARESRKNQ
QQTVVKEQKL RPKIDPHDYE TKKGHVIRFL EAGSKVKVTI MFRGREQSRP ELGFRLLQRL
GADVAEYGFI ETSAKQDGRN MTMVLAPHRG AKTRAKAAHD ADTPAGQRGD AQAADAPTDT
PKN